RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PER3P56645 1201 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NFE2L1Q14494 772 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SSPNQ14714 243 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GPR19Q15760 415 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HGSNATQ68CP4 663 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RHOT2Q8IXI1 618 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DSELQ8IZU8 1212 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ENDOVQ8N8Q3 282 aaKnown RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RASGEF1AQ8N9B8 481 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GLIS1Q8NBF1 620 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DDHD1Q8NEL9 900 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ACVR1CQ8NER5 493 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR4E2Q8NGC2 313 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR2L2Q8NH16 312 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SPATA22Q8NHS9 363 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 BLOC1S5Q8TDH9 187 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DENND1AQ8TEH3 1009 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LCN9Q8WX39 176 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RAPGEF5Q92565 580 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 P3H4Q92791 437 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF501Q96CX3 271 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TEKT5Q96M29 485 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FERD3LQ96RJ6 166 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CEP41Q9BYV8 373 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ILKAPQ9H0C8 392 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 WWP1Q9H0M0 922 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IL26Q9NPH9 171 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC24A2Q9UI40 661 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 COPG1Q9Y678 874 aaKnown RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 UBR5O95071 2799 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TCP11X1B4DZS4 312 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AKR1B10O60218 316 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A9O60656 530 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CEACAM4O75871 244 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ANXA9O76027 345 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SORBS2O94875 1100 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PDGFAP04085 211 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 KRT1P04264 644 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 POLBP06746 335 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A6P19224 532 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 POLR2CP19387 275 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A1P22309 533 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A4P22310 534 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ITGA1P56199 1179 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 WNT3AP56704 352 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TAS2R40P59535 323 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DYNLT1P63172 113 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FANCCQ00597 558 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MPP3Q13368 585 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZRANB3Q5FWF4 1079 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PLEKHS1Q5SXH7 462 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 VWA5B1Q5TIE3 1220 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 LRRC38Q5VT99 294 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MLIPQ5VWP3 458 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 E4F1Q66K89 784 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC9A4Q6AI14 798 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FAM151BQ6UXP7 276 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 C11orf96Q7Z7L8 435 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CFAP206Q8IYR0 622 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC34A3Q8N130 599 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC25A41Q8N5S1 370 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PLD5Q8N7P1 536 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FDCSPQ8NFU4 85 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 MOCOSQ96EN8 888 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 KIR3DX1Q9H7L2 352 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A7Q9HAW7 530 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A10Q9HAW8 530 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UGT1A8Q9HAW9 530 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 UBP1Q9NZI7 540 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IL17CQ9P0M4 197 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NDOR1Q9UHB4 597 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TRHDEQ9UKU6 1024 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 BTRCQ9Y297 605 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CFAP20Q9Y6A4 193 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AP1M2Q9Y6Q5 423 aa11.95□□□□□ -0.5
HLA-DQB3-203ENST00000425319 LOC285095A0A1B0GVY8 99 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 C5orf60A6NFR6 353 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC9B1P1A6NJY1 282 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 C2orf74A8MZ97 194 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TMEM150CB9EJG8 249 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SEMA7AO75326 666 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CRTAMO95727 393 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GLRBP48167 497 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GEMP55040 296 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GPS2Q13227 327 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC18A3Q16572 532 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GPRC6AQ5T6X5 926 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CPZQ66K79 652 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SARM1Q6SZW1 724 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DET1Q7L5Y6 550 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SYTL1Q8IYJ3 562 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 COG1Q8WTW3 980 aa11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PPP1R2P1Q96PQ5 205 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms