RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 CPNE3O75131 537 aaKnown RBP7.89□□□□□ -1.15
VIM-202ENST00000421459 CLDN1O95832 211 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 AGTP01019 485 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 CTSBP07858 339 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 TMEM253P0C7T8 217 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 PVRP15151 417 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 LPOP22079 712 aaPredicted RBP7.89□□□□□ -1.15
VIM-202ENST00000421459 LMAN1P49257 510 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 DMPKQ09013 629 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 PRKD1Q15139 912 aaPredicted RBP7.89□□□□□ -1.15
VIM-202ENST00000421459 SLC1A5Q15758 541 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 SLC18A3Q16572 532 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 ZNF789Q5FWF6 425 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 LDLRAP1Q5SW96 308 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 METRNLQ641Q3 311 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 SLC6A19Q695T7 634 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 ZNF517Q6ZMY9 492 aaPredicted RBP7.89□□□□□ -1.15
VIM-202ENST00000421459 GLT6D1Q7Z4J2 308 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
VIM-202ENST00000421459 CFAP206Q8IYR0 622 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 DSELQ8IZU8 1212 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 ZNF567Q8N184 647 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 DDHD1Q8NEL9 900 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 IPMKQ8NFU5 416 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 BRSK1Q8TDC3 778 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 THAP4Q8WY91 577 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 TCTN2Q96GX1 697 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 RMDN2Q96LZ7 410 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 FCRL4Q96PJ5 515 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 CHP1Q99653 195 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 APOL2Q9BQE5 337 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 GORASP1Q9BQQ3 440 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 GOLPH3Q9H4A6 298 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 PCMTD2Q9NV79 361 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 SOHLH2Q9NX45 425 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 FAM153AQ9UHL3 310 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 SLC24A2Q9UI40 661 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 TCFL5Q9UL49 500 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 NBASA2RRP1 2371 aa7.89□□□□□ -1.15
VIM-202ENST00000421459 CRYBG3Q68DQ2 2970 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ZNF106Q9H2Y7 1883 aaKnown RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 SYCE3A1L190 88 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 MGAT4DA6NG13 374 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 TMEM150CB9EJG8 249 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 GOLGA6L22H0YM25 854 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 BTN3A3O00478 584 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 CCL22O00626 93 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 HCRTR1O43613 425 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 CST8O60676 142 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 CEACAM4O75871 244 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 TMEM63AO94886 807 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ZBTB11O95625 1053 aaPredicted RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 PRSS56P0CW18 603 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ST6GAL1P15907 406 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 MSH3P20585 1137 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 AKT1P31749 480 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 RORAP35398 523 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 CDKN2BP42772 138 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 TMPRSS15P98073 1019 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 PDE1BQ01064 536 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ATP1A4Q13733 1029 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 GSE1Q14687 1217 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 NR6A1Q15406 480 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 SLC14A2Q15849 920 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 IZUMO3Q5VZ72 239 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 PAPD7Q5XG87 772 aaKnown RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 ARMC6Q6NXE6 501 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 KLHL35Q6PF15 583 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 FAM198BQ6UWH4 519 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 PID1Q7Z2X4 250 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 OOSP2Q86WS3 158 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 KMT5CQ86Y97 462 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 CISD2Q8N5K1 135 aaKnown RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 PHC3Q8NDX5 983 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ZNF398Q8TD17 642 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 TFB1MQ8WVM0 346 aaKnown RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 CLIP3Q96DZ5 547 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 RANBP9Q96S59 729 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 FICDQ9BVA6 458 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 XKR8Q9H6D3 395 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 KIR3DX1Q9H7L2 352 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 SLAMF7Q9NQ25 335 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 KLHL8Q9P2G9 620 aaPredicted RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ERRFI1Q9UJM3 462 aaPredicted RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 SNX7Q9UNH6 387 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 ZNF451Q9Y4E5 1061 aa7.88□□□□□ -1.15
VIM-202ENST00000421459 PCDHGA9Q9Y5G4 932 aaKnown RBP7.88□□□□□ -1.15
VIM-202ENST00000421459 PRRC2CQ9Y520 2896 aaKnown RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 GSAPA4D1B5 854 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 ZNF487B1APH4 448 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 KCNJ13O60928 360 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 PRAMEF1O95521 474 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 KLK3P07288 261 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 CBSLP0DN79 551 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 ZFXP17010 805 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 HLA-DPA1P20036 260 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 COMTP21964 271 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CDH3P22223 829 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms