RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	FBXO25	Q8TCJ0	367 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	SEC14L1	Q92503	715 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	CERS2	Q96G23	380 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	GFM1	Q96RP9	751 aa	Known RBP	18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	SLC38A3	Q99624	504 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	PLAC1	Q9HBJ0	212 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	KLK13	Q9UKR3	277 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	ANGPTL2	Q9UKU9	493 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	CLCA2	Q9UQC9	943 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	NEUROG3	Q9Y4Z2	214 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124	PCDHB1	Q9Y5F3	818 aa		18.2	■□□□□ 0.5
DDR1-233	ENST00000421124		A0A1W2PQM1	296 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ESYT3	A0FGR9	886 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	CASC3	O15234	703 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	B4GAT1	O43505	415 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ZNF500	O60304	480 aa	Predicted RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	TCEA3	O75764	348 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	S1PR4	O95977	384 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	MTHFD1	P11586	935 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	JUP	P14923	745 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ITGB6	P18564	788 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	SLC1A2	P43004	574 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ADAR	P55265	1226 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	CTBP1	Q13363	440 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	BOP1	Q14137	746 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	SYTL3	Q4VX76	610 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ZDHHC24	Q6UX98	284 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ZNF761	Q86XN6	746 aa	Predicted RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	DENND6A	Q8IWF6	608 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	RBM12B	Q8IXT5	1001 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	ZBED8	Q8IZ13	594 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	CACTIN-AS1	Q8N1I8	211 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	RMDN2	Q96LZ7	410 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	C12orf66	Q96MD2	445 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	PANX3	Q96QZ0	392 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	INSM2	Q96T92	566 aa	Predicted RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	PHACTR1	Q9C0D0	580 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	OR52A5	Q9H2C5	316 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	EPB41L5	Q9HCM4	733 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	SAYSD1	Q9NPB0	183 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	IARS2	Q9NSE4	1012 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	IMP3	Q9NV31	184 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	KCNK4	Q9NYG8	393 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	FBXO5	Q9UKT4	447 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	CRYL1	Q9Y2S2	319 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	KNTC1	P50748	2209 aa		18.19	■□□□□ 0.5
DDR1-233	ENST00000421124	SPEG	Q15772	3267 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	IGHV1OR21-1	A0A087WYE8	117 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FAM149A	A5PLN7	773 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FAM221B	A6H8Z2	402 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	LILRA5	A6NI73	299 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	IQCF5	A8MTL0	148 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	BHMG1	C9JSJ3	638 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124		H3BMM5	538 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	ESR1	P03372	595 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	ERVK-10	P10266	1014 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FMO4	P31512	558 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	CCR7	P32248	378 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	PREP	P48147	710 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	PLOD1	Q02809	727 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	BRD3	Q15059	726 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	ZNF789	Q5FWF6	425 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	CAPRIN2	Q6IMN6	1127 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	RBM44	Q6ZP01	1051 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	KRT222	Q8N1A0	295 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	DCBLD1	Q8N8Z6	715 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	SPDYE1	Q8NFV5	336 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	LKAAEAR1	Q8TD35	194 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	PYROXD1	Q8WU10	500 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	BIRC8	Q96P09	236 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	DEPDC7	Q96QD5	511 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FOXP3	Q9BZS1	431 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	UCK1	Q9HA47	277 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	SLC40A1	Q9NP59	571 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FBXO6	Q9NRD1	293 aa	Predicted RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	FAM114A2	Q9NRY5	505 aa		18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	DMGDH	Q9UI17	866 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	CFAP20	Q9Y6A4	193 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-233	ENST00000421124	SLC5A10	A0PJK1	596 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124		D6RAR5	112 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	IFRD1	O00458	451 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	PDHA2	P29803	388 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	CD151	P48509	253 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	EPHA4	P54764	986 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	GPLD1	P80108	840 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	FRG1	Q14331	258 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	TMED2	Q15363	201 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	AMZ1	Q400G9	498 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	CTSL3P	Q5NE16	218 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	NAPRT	Q6XQN6	538 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	TMEM26	Q6ZUK4	368 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	C2CD4A	Q8NCU7	369 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	GSDMB	Q8TAX9	411 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	TMEM159	Q96B96	161 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	PPAN	Q9NQ55	473 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	MSRB2	Q9Y3D2	182 aa		18.17	■□□□□ 0.5
DDR1-233	ENST00000421124	HEBP2	Q9Y5Z4	205 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms