RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RBM20Q5T481 1227 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TTC23LQ6PF05 361 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 FBXO38Q6PIJ6 1188 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TBC1D1Q86TI0 1168 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 MYO1HQ8N1T3 1032 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SDR16C5Q8N3Y7 309 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SIDT2Q8NBJ9 832 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 INPP5DQ92835 1189 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 CXorf40BQ96DE9 158 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 LINC00615Q96LM1 132 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 BIRC8Q96P09 236 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 GPR22Q99680 433 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 ROPN1BQ9BZX4 212 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 IQCGQ9H095 443 aaKnown RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 STMN4Q9H169 189 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 VPS11Q9H270 941 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TCEAL2Q9H3H9 227 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 COG4Q9H9E3 785 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 ROPN1Q9HAT0 212 aaPredicted RBP8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SYTL2Q9HCH5 934 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 GPAMQ9HCL2 828 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 TM7SF3Q9NS93 570 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 SIRPGQ9P1W8 387 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 FETUBQ9UGM5 382 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF180Q9UJW8 692 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 ACSL5Q9ULC5 683 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 PSMD13Q9UNM6 376 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 PLEKHM1Q9Y4G2 1056 aa8.31□□□□□ -1.08
TRIM48-201ENST00000417545 LNP1A1A4G5 178 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 KDM1AO60341 852 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 MT-ND3P03897 115 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 RPN2P04844 631 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CBSLP0DN79 551 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 ENO3P13929 434 aaPredicted RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 RPL10P27635 214 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 GABRB3P28472 473 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CRABP2P29373 138 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CCR7P32248 378 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CBSP35520 551 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 MAPK9P45984 424 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 RXRGP48443 463 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CLCNKAP51800 687 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 KPNA2P52292 529 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 IL2P60568 153 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 RAB10P61026 200 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 DAB2P98082 770 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 BNC1Q01954 994 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 BNIP3Q12983 259 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CASP8Q14790 479 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 PLA2G2CQ5R387 149 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 KLC3Q6P597 504 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 LRIG3Q6UXM1 1119 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 NAPRTQ6XQN6 538 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 PRR23CQ6ZRP0 262 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 FRA10AC1Q70Z53 315 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 PIM3Q86V86 326 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 GATAD2AQ86YP4 633 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF547Q8IVP9 402 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CPNE9Q8IYJ1 553 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 NKAPQ8N5F7 415 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 AVL9Q8NBF6 648 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 OR2I1PQ8NGU4 316 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CFAP61Q8NHU2 1237 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CCL4L1Q8NHW4 92 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 MAPK15Q8TD08 544 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 LKAAEAR1Q8TD35 194 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 SETD7Q8WTS6 366 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 ZDHHC1Q8WTX9 485 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 DCAKDQ8WVC6 231 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CABS1Q96KC9 395 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 C12orf66Q96MD2 445 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 ZIM3Q96PE6 472 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 DUSP23Q9BVJ7 150 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 WWP1Q9H0M0 922 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CAB39LQ9H9S4 337 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 IL21RQ9HBE5 538 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 POPDC3Q9HBV1 291 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 SNX15Q9NRS6 342 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 IMP3Q9NV31 184 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 TAAR2Q9P1P5 351 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 GULP1Q9UBP9 304 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 MTO1Q9Y2Z2 717 aaKnown RBP8.3□□□□□ -1.08
TRIM48-201ENST00000417545 HEBP2Q9Y5Z4 205 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 CSNK1G3Q9Y6M4 447 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 SDK1Q7Z5N4 2213 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 PCDH15Q96QU1 1955 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 BPTFQ12830 3046 aa8.3□□□□□ -1.08
TRIM48-201ENST00000417545 TRBV23OR9-2A0A075B6M9 112 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 A0A087X1B8 175 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 OR5K4A6NMS3 321 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 LMO7DNF2Z398 122 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TPP1O14773 563 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PHGDHO43175 533 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 VIPP01282 170 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 MPOP05164 745 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms