RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 MT-ND2P03891 347 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CYP2C8P10632 490 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.41e-5■■■□□ 17.9
CCNT1-202ENST00000417344 CHRM3P20309 590 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 GPX3P22352 226 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 KELP23276 732 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 MSX1P28360 303 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SHMT1P34896 483 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 HMGCLP35914 325 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 MTHFRP42898 656 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CPT1AP50416 773 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OLR1P78380 273 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 IL5RAQ01344 420 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 LIPEQ05469 1076 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RGS1Q08116 209 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 IL18R1Q13478 541 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 UGP2Q16851 508 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 KIF19Q2TAC6 998 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SPANXN3Q5MJ09 141 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 BSPRYQ5W0U4 402 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF470Q6ECI4 717 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 LAMTOR1Q6IAA8 161 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SCARA5Q6ZMJ2 495 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 PIWIL4Q7Z3Z4 852 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 B3GNT8Q7Z7M8 397 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FAM160B2Q86V87 743 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 PROSER1Q86XN7 944 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 PGBD3Q8N328 593 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FSTL5Q8N475 847 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF557Q8N988 423 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM161BQ8NDZ6 487 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OR8H1Q8NGG4 311 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 KLHL6Q8WZ60 621 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM125Q96AQ2 219 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CDCA5Q96FF9 252 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RBM4BQ9BQ04 359 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RBM4Q9BWF3 364 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 GTPBP2Q9BX10 602 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TEKT3Q9BXF9 490 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ITPAQ9BY32 194 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 UGT2B28Q9BY64 529 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TRIM54Q9BYV2 358 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TRIM8Q9BZR9 551 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SLC6A17Q9H1V8 727 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 QTRT2Q9H974 415 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SLC35C2Q9NQQ7 365 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SCN3BQ9NY72 215 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 USE1Q9NZ43 259 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 XPR1Q9UBH6 696 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 MAGED2Q9UNF1 606 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RUVBL2Q9Y230 463 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CSNK1G3Q9Y6M4 447 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CNTNAP4Q9C0A0 1308 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CIB4A0PJX0 185 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF98A6NK75 572 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 F5H423 210 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 BTN3A3O00478 584 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 NCAM2O15394 837 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RGS10O43665 173 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 MRPS14O60783 128 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SUPT7LO94864 414 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 RAP2AP10114 183 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TGFB3P10600 412 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CAPN3P20807 821 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 MYL9P24844 172 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 YWHAQP27348 245 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 HLA-DMAP28067 261 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FMO3P31513 532 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 HTR7P34969 479 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 LIPAP38571 399 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CSRP3P50461 194 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 BLVRAP53004 296 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SNAP25P60880 206 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SCRN3Q0VDG4 424 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 AANATQ16613 207 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 UGT3A2Q3SY77 523 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SETMARQ53H47 684 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ARMCX4Q5H9R4 360 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 NOL9Q5SY16 702 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TSTD2Q5T7W7 516 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 B3GNT9Q6UX72 402 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 C16orf62Q7Z3J2 963 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 GPAT4Q86UL3 456 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TXNRD3Q86VQ6 643 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 NLRP8Q86W28 1048 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 GPALPP1Q8IXQ4 340 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TAGAPQ8N103 731 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CARNMT1Q8N4J0 409 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ACVR1CQ8NER5 493 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 KBTBD8Q8NFY9 601 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OR52H1Q8NGJ2 320 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FANK1Q8TC84 345 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms