RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMEM139Q8IV31 216 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 CFAP206Q8IYR0 622 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 NXPE1Q8N323 547 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 FAM71DQ8N9W8 422 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 HM13Q8TCT9 377 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 FCRL4Q96PJ5 515 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 COPS8Q99627 209 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 HRASLS2Q9NWW9 162 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 IMPACTQ9P2X3 320 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 TUBD1Q9UJT1 453 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 RARRES3Q9UL19 164 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 HEBP2Q9Y5Z4 205 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 COLEC10Q9Y6Z7 277 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 IGHV5-51A0A0C4DH38 117 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 C17orf113A0A1B0GUU1 675 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 OR5K3A6NET4 321 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 DDX3YO15523 660 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 LDB2O43679 373 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 SGTAO43765 313 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 POLBP06746 335 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 ATP1B2P14415 290 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 TCN2P20062 427 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 POLE2P56282 527 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 PPP1CAP62136 330 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 ACY1Q03154 408 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 KLF1Q13351 362 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 P3H1Q32P28 736 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 CAPRIN2Q6IMN6 1127 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 ARMC6Q6NXE6 501 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 GAS2L3Q86XJ1 694 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 GALNT6Q8NCL4 622 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 STARD8Q92502 1023 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 ELMO2Q96JJ3 720 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 FAM96AQ9H5X1 160 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 KIR3DX1Q9H7L2 352 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 LRRC40Q9H9A6 602 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 ZDHHC3Q9NYG2 299 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 FAM8A1Q9UBU6 413 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 SLC24A2Q9UI40 661 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 LNPEPQ9UIQ6 1025 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 PACSIN2Q9UNF0 486 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 PCDHB3Q9Y5E6 796 aa17.17■□□□□ 0.34
PDLIM2-208ENST00000416159 UBA6A0AVT1 1052 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 TLCD2A6NGC4 264 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 H7C0S8 307 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 METTL18O95568 372 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 FTCDO95954 541 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 MC4RP32245 332 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 DLSTP36957 453 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 ARL4DP49703 201 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 KCNAB2Q13303 367 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 KRT33BQ14525 404 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 ZRANB3Q5FWF4 1079 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 DUS1LQ6P1R4 473 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 C16orf46Q6P387 395 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 ATG14Q6ZNE5 492 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 CARFQ8N187 725 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 SLC35B2Q8TB61 432 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 STYXQ8WUJ0 223 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 NAT14Q8WUY8 206 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 DNAJC1Q96KC8 554 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 RMDN2Q96LZ7 410 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 NLE1Q9NVX2 485 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 KCND3Q9UK17 655 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 CROTQ9UKG9 612 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 PADI1Q9ULC6 663 aa17.16■□□□□ 0.34
PDLIM2-208ENST00000416159 IGLV3-16A0A075B6K0 115 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TRBV5-4A0A0C4DH59 114 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 SUV39H1O43463 412 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 FOLR1P15328 257 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TPH1P17752 444 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 ACRV1P26436 265 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 CDC25BP30305 580 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TUBB3Q13509 450 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 ZNF449Q6P9G9 518 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TAS2R42Q7RTR8 314 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 D2HGDHQ8N465 521 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 RNF10Q8N5U6 811 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 CDKN2AIPNLQ96HQ2 116 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 HES6Q96HZ4 224 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 ALS2CR12Q96Q35 445 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TMEM121Q9BTD3 319 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
PDLIM2-208ENST00000416159 TLN1Q9Y490 2541 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 OR6C74A6NCV1 312 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 CCL22O00626 93 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 WISP1O95388 367 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 ZBTB11O95625 1053 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 AP2A1O95782 977 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 F8A1P23610 371 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 STIP1P31948 543 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms