RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HOXA2O43364 376 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 BMP2P12643 396 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 MAGP20916 626 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 BCAR1P56945 870 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 KLF10Q13118 480 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ZNF273Q14593 569 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 KCNJ11Q14654 390 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 IQCCQ4KMZ1 466 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ZSCAN18Q8TBC5 510 aaPredicted RBP20.12■□□□□ 0.81
AP1S3-205ENST00000415298 TINAGL1Q9GZM7 467 aaPredicted RBP20.12■□□□□ 0.81
AP1S3-205ENST00000415298 TOR3AQ9H497 397 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ZFP14Q9HCL3 533 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ZNF224Q9NZL3 707 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 EDARQ9UNE0 448 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 WDPCPO95876 746 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 CPB1P15086 417 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 HTR1BP28222 390 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 CAPZA2P47755 286 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 LRRC74AQ0VAA2 488 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 PSMD5Q16401 504 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ANKS3Q6ZW76 656 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 STX12Q86Y82 276 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 NCLNQ969V3 563 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ARL5BQ96KC2 179 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 HSFY1Q96LI6 401 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ELOVL4Q9GZR5 314 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 CWH43Q9H720 699 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 TRIM45Q9H8W5 580 aaPredicted RBP20.12■□□□□ 0.81
AP1S3-205ENST00000415298 ANKHQ9HCJ1 492 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 FBXL12Q9NXK8 326 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 CNTN6Q9UQ52 1028 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 HSPE1-MOB4S4R3N1 261 aa20.12■□□□□ 0.81
AP1S3-205ENST00000415298 DCXO43602 365 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 CILPO75339 1184 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 GALTP07902 379 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 SRCP12931 536 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 ZNF30P17039 623 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 IDH3AP50213 366 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 GDI2P50395 445 aaKnown RBP20.11■□□□□ 0.81
AP1S3-205ENST00000415298 FLI1Q01543 452 aaPredicted RBP20.11■□□□□ 0.81
AP1S3-205ENST00000415298 RHDQ02161 417 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 FAPQ12884 760 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 TSC22D1Q15714 1073 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 RTP2Q5QGT7 225 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 INTS11Q5TA45 600 aaKnown RBP20.11■□□□□ 0.81
AP1S3-205ENST00000415298 OR6B3Q8NGW1 331 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 ST8SIA4Q92187 359 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 NXNL1Q96CM4 212 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 PHOX2BQ99453 314 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 NUSAP1Q9BXS6 441 aaKnown RBP20.11■□□□□ 0.81
AP1S3-205ENST00000415298 EFCAB14O75071 495 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 GPC5P78333 572 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 BTN1A1Q13410 526 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 NXNL2Q5VZ03 156 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 PGAM4Q8N0Y7 254 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 C12orf29Q8N999 325 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 CYGBQ8WWM9 190 aa20.11■□□□□ 0.81
AP1S3-205ENST00000415298 MAGED2Q9UNF1 606 aaPredicted RBP20.11■□□□□ 0.81
AP1S3-205ENST00000415298 NUPL2O15504 423 aaKnown RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 HUS1O60921 280 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 DGKQP52824 942 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 ABRQ12979 859 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 TEDDM1Q5T9Z0 273 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 PSRC1Q6PGN9 363 aaPredicted RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 CDHR3Q6ZTQ4 885 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 GANCQ8TET4 914 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 TFAP2BQ92481 460 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 FBXL20Q96IG2 436 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 TAS2R9Q9NYW1 312 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 NOCTQ9UK39 431 aaKnown RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 GJB5O95377 273 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 SLC7A1P30825 629 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 CCR10P46092 362 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 VWA5B1Q5TIE3 1220 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 PIK3R6Q5UE93 754 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 DPH6Q7L8W6 267 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 PAGE2Q7Z2X7 111 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 RNF148Q8N7C7 305 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 FAM83FQ8NEG4 500 aaPredicted RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 DDX1Q92499 740 aaKnown RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 DUS3LQ96G46 650 aaKnown RBP20.1■□□□□ 0.81
AP1S3-205ENST00000415298 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 MIR1-1HGQ9H1L0 117 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 CYP3A43Q9HB55 503 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 NECTIN3Q9NQS3 549 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 MARCH5Q9NX47 278 aa20.1■□□□□ 0.81
AP1S3-205ENST00000415298 C7P10643 843 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 HPGDP15428 266 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 SSTR1P30872 391 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 RPL35P42766 123 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 LIPIQ6XZB0 460 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ACOT1Q86TX2 421 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 GPAT4Q86UL3 456 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ZNF366Q8N895 744 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 OR13J1Q8NGT2 312 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 OR52N1Q8NH53 320 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 USP13Q92995 863 aaPredicted RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ZNF778Q96MU6 729 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 CNPY3Q9BT09 278 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms