RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SGTAO43765 313 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 BRINP1O60477 761 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 USP1O94782 785 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 TTC4O95801 387 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 TMED2Q15363 201 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ARMC6Q6NXE6 501 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 IGF2-ASQ6U949 168 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 PROSER1Q86XN7 944 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 SLITRK4Q8IW52 837 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 AGBL5Q8NDL9 886 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 SPATA4Q8NEY3 305 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ASZ1Q8WWH4 475 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 FGF11Q92914 225 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ZNF669Q96BR6 464 aaPredicted RBP14.39□□□□□ -0.11
CHD1-202ENST00000414220 CCDC97Q96F63 343 aaPredicted RBP14.39□□□□□ -0.11
CHD1-202ENST00000414220 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ZDHHC12Q96GR4 267 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 SNF8Q96H20 258 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 FERD3LQ96RJ6 166 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 INSM2Q96T92 566 aaPredicted RBP14.39□□□□□ -0.11
CHD1-202ENST00000414220 NUDT22Q9BRQ3 303 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 CARD6Q9BX69 1037 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 TBC1D10AQ9BXI6 508 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ZMIZ1Q9ULJ6 1067 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 LOXL2Q9Y4K0 774 aa14.39□□□□□ -0.11
CHD1-202ENST00000414220 ARHGEF17Q96PE2 2063 aaPredicted RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 UBA6A0AVT1 1052 aaPredicted RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 TTI1O43156 1089 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 TNFSF15O95150 251 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 APOA4P06727 396 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 OGNP20774 298 aaKnown RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 PRKAA1Q13131 559 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 BOP1Q14137 746 aaKnown RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 GPR18Q14330 331 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 ANKRD20A4Q4UJ75 823 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 NEPROQ6NW34 567 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 CES3Q6UWW8 571 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 LRRC69Q6ZNQ3 347 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 B3GNT8Q7Z7M8 397 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 GPR150Q8NGU9 434 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 CCDC74BQ96LY2 380 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 SEMA6CQ9H3T2 930 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 MVB12BQ9H7P6 319 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
CHD1-202ENST00000414220 ZNF106Q9H2Y7 1883 aaKnown RBP14.38□□□□□ -0.11
CHD1-202ENST00000414220 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TOX3O15405 576 aaPredicted RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 OR1I1O60431 355 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 ITGA2BP08514 1039 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 THRAP10827 490 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TYRP1P17643 537 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 PGAM1P18669 254 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 RPS3P23396 243 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHD1-202ENST00000414220 PDX1P52945 283 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 ARL4CP56559 192 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TUBB2AQ13885 445 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 LONRF1Q17RB8 773 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TBC1D25Q3MII6 688 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 SNAP47Q5SQN1 464 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TMEM135Q86UB9 458 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 OOSP2Q86WS3 158 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHD1-202ENST00000414220 NAT14Q8WUY8 206 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 ZNF592Q92610 1267 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TFGQ92734 400 aaPredicted RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 LRRC39Q96DD0 335 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 SLC46A1Q96NT5 459 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 TUBB2BQ9BVA1 445 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 C20orf96Q9NUD7 363 aaPredicted RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 PISDQ9UG56 409 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 UTP11Q9Y3A2 253 aaKnown RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 MRFAP1Q9Y605 127 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 CFAP20Q9Y6A4 193 aaKnown RBP14.37□□□□□ -0.11
CHD1-202ENST00000414220 PRSS21Q9Y6M0 314 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 RP1P56715 2156 aa14.37□□□□□ -0.11
CHD1-202ENST00000414220 ESR1P03372 595 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 RPN2P04844 631 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 HOXB3P14651 431 aaPredicted RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 MAGEA3P43357 314 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 CAPZBP47756 277 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 PCBP4P57723 403 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 SEMA3AQ14563 771 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 KCTD19Q17RG1 926 aaPredicted RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 BBS9Q3SYG4 887 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 CYB5D1Q6P9G0 228 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 TTC23LQ6PF05 361 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 ZNF574Q6ZN55 896 aaPredicted RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 OTOAQ7RTW8 1153 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 LDB1Q86U70 411 aaPredicted RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 ZNF248Q8NDW4 579 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms