RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TMEM168Q9H0V1 697 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RIMS4Q9H426 269 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 EPB41L1Q9H4G0 881 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CATSPERBQ9H7T0 1116 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 VCX3AQ9NNX9 186 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SLC40A1Q9NP59 571 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 GPRC5CQ9NQ84 441 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PRDM8Q9NQV8 689 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DIABLOQ9NR28 239 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 EXD2Q9NVH0 621 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DNAJC28Q9NX36 388 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RBAKQ9NYW8 714 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 H2AFY2Q9P0M6 372 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CLEC1BQ9P126 229 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 BTBD7Q9P203 1132 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NYAP2Q9P242 653 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LRP2BPQ9P2M1 347 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 IL20RAQ9UHF4 553 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF229Q9UJW7 825 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 HSF4Q9ULV5 492 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SNX7Q9UNH6 387 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MAN2B2Q9Y2E5 1009 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PLEKHA6Q9Y2H5 1048 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 STRAPQ9Y3F4 350 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SIT1Q9Y3P8 196 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF175Q9Y473 711 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PLEKHM1Q9Y4G2 1056 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PCDHB1Q9Y5F3 818 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PCDHA1Q9Y5I3 950 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 KLF2Q9Y5W3 355 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 STK36Q9NRP7 1315 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 KDM3AQ9Y4C1 1321 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZMYM3Q14202 1370 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ERBINQ96RT1 1412 aa3.59□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1B0GVG6 124 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQ27 194 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQ64 194 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQC6 194 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQD8 194 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MEX3AA1L020 520 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NPIPB15A6NHN6 443 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 LIPT2A6NK58 231 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 C12orf71A8MTZ7 269 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 A8MX80 341 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 E7ENQ6 273 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TNPO2O14787 897 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AP5Z1O43299 807 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KCNAB3O43448 404 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 B4GAT1O43505 415 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ASNA1O43681 348 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SERPINB7O75635 380 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AKAP3O75969 853 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 THBDP07204 575 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CYP21A2P08686 494 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 STSP08842 583 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 IQCF3P0C7M6 154 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 STAG3L2P0CL84 134 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SLC2A3P11169 496 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PLS3P13797 630 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TYRP14679 529 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TCF4P15884 667 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ERCC2P18074 760 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 EPORP19235 508 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SRMP19623 302 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NCF2P19878 526 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PRPS1L1P21108 318 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GSTM2P28161 218 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GRK3P35626 688 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NUDT1P36639 197 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PAFAH1B1P43034 410 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 LIG4P49917 911 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GNG10P50151 68 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CAPZA1P52907 286 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ARFIP2P53365 341 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ITGA1P56199 1179 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AP1S2P56377 157 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NOMO3P69849 1222 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SRSF2Q01130 221 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TGM3Q08188 693 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 STX5Q13190 355 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OLIG2Q13516 323 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SNTB1Q13884 538 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GPR176Q14439 515 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PDCD1Q15116 288 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NOMO1Q15155 1222 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PPP1R3AQ16821 1122 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SLC5A12Q1EHB4 618 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PRSS53Q2L4Q9 553 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NOMO2Q5JPE7 1267 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CDKL4Q5MAI5 379 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 EOGTQ5NDL2 527 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GCNT6Q5T4J0 391 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 HES5Q5TA89 166 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 RAET1GQ6H3X3 334 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CDC73Q6P1J9 531 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 C1orf94Q6P1W5 598 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TMEM71Q6P5X7 295 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CLEC9AQ6UXN8 241 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TMIGD1Q6UXZ0 262 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms