RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CAPRIN2Q6IMN6 1127 aaKnown RBP14.48□□□□□ -0.09
LIMS4-201ENST00000413601 CCDC137Q6PK04 289 aaKnown RBP14.48□□□□□ -0.09
LIMS4-201ENST00000413601 AFTPHQ6ULP2 937 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 ZNF534Q76KX8 674 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 ZFAND4Q86XD8 727 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 OR4L1Q8NH43 312 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 ACTRT1Q8TDG2 376 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIMS4-201ENST00000413601 C9orf72Q96LT7 481 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 TGM7Q96PF1 710 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 COG4Q9H9E3 785 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 VPS37BQ9H9H4 285 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 SLC39A1Q9NY26 324 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
LIMS4-201ENST00000413601 BFARQ9NZS9 450 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 ACSL6Q9UKU0 697 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 SNX12Q9UMY4 172 aa14.48□□□□□ -0.09
LIMS4-201ENST00000413601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.47□□□□□ -0.09
LIMS4-201ENST00000413601 CAPN5O15484 640 aaPredicted RBP14.47□□□□□ -0.09
LIMS4-201ENST00000413601 OR1I1O60431 355 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 AP2A2O94973 939 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 TPSB2P20231 275 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 MGAT1P26572 445 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 NMBRP28336 390 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 CAPZBP47756 277 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 CXADRP78310 365 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 CDK16Q00536 496 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 SEMA3AQ14563 771 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 KCNJ11Q14654 390 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PLCL1Q15111 1095 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 TPSAB1Q15661 275 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 FASTKD1Q53R41 847 aaKnown RBP14.47□□□□□ -0.09
LIMS4-201ENST00000413601 LRRC8BQ6P9F7 803 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PACS1Q6VY07 963 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 BMPERQ8N8U9 685 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PEX13Q92968 403 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 FCRL3Q96P31 734 aaPredicted RBP14.47□□□□□ -0.09
LIMS4-201ENST00000413601 IL22Q9GZX6 179 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 OR52A5Q9H2C5 316 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PRORYQ9H606 182 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 CPNE5Q9HCH3 593 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 SYBUQ9NX95 663 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PYCARDQ9ULZ3 195 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 B3GALT1Q9Y5Z6 326 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 PTPRQQ9UMZ3 2332 aa14.47□□□□□ -0.09
LIMS4-201ENST00000413601 B4E171 279 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 AP3B1O00203 1094 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 CES2O00748 559 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 KIF1CO43896 1103 aaKnown RBP14.46□□□□□ -0.09
LIMS4-201ENST00000413601 PHF2O75151 1096 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 AVILO75366 819 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 PDHA2P29803 388 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 TSPAN7P41732 249 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 PREPP48147 710 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 TMPRSS3P57727 454 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 PPP1CAP62136 330 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 MC2RQ01718 297 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 KRT33BQ14525 404 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 LYPLAL1Q5VWZ2 237 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 ANKRD22Q5VYY1 191 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 IRGCQ6NXR0 463 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 FAM92BQ6ZTR7 304 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 LDB1Q86U70 411 aaPredicted RBP14.46□□□□□ -0.09
LIMS4-201ENST00000413601 SGSM3Q96HU1 749 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 TTC1Q99614 292 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 B3GNT4Q9C0J1 378 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 TREX1Q9NSU2 369 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 MARCH4Q9P2E8 410 aaPredicted RBP14.46□□□□□ -0.09
LIMS4-201ENST00000413601 SLC24A2Q9UI40 661 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 NEU2Q9Y3R4 380 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 COLEC10Q9Y6Z7 277 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 NBEAQ8NFP9 2946 aa14.46□□□□□ -0.09
LIMS4-201ENST00000413601 ITPR1Q14643 2758 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 GOLGA6L10A0A0M3HER8 536 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 QSOX1O00391 747 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 RASSF9O75901 435 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ANKRD34CP0C6C1 535 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 LIPCP11150 499 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 MAGEA6P43360 314 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 SEPHS1P49903 392 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 UCNP55089 124 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 GNG11P61952 73 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 BRD3Q15059 726 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 DCAF12Q5T6F0 453 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 CACHD1Q5VU97 1274 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ANKS6Q68DC2 871 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ZNF449Q6P9G9 518 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 NAPRTQ6XQN6 538 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 CERS6Q6ZMG9 384 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 PHC3Q8NDX5 983 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ZFPM2Q8WW38 1151 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 CPT1BQ92523 772 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ELMO1Q92556 727 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 ZDHHC12Q96GR4 267 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 FERD3LQ96RJ6 166 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 CTRCQ99895 268 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 DDA1Q9BW61 102 aa14.45□□□□□ -0.1
LIMS4-201ENST00000413601 RAB33BQ9H082 229 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms