RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PRMT9Q6P2P2 845 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TP53INP2Q8IXH6 220 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TRPC4APQ8TEL6 797 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 NXNL1Q96CM4 212 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CLEC4MQ9H2X3 399 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TFB2MQ9H5Q4 396 aaKnown RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CARS2Q9HA77 564 aaKnown RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 LMAN1LQ9HAT1 526 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SPATA6Q9NWH7 488 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CCL26Q9Y258 94 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 PIPSLA2A3N6 862 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 LIN7AO14910 233 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ATP6V1G2O95670 118 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 TNFP01375 233 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GSTM1P09488 218 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ITGB7P26010 798 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 MAGEA6P43360 314 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GALK1P51570 392 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 PNLIPRP1P54315 467 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GSTM4Q03013 218 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 KPNB1Q14974 876 aaKnown RBP8.4□□□□□ -1.06
SYNE1-211ENST00000413186 PHKG1Q16816 387 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GPRC6AQ5T6X5 926 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 KLHL24Q6TFL4 600 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 C11orf96Q7Z7L8 435 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ADGRD2Q7Z7M1 963 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM135Q86UB9 458 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 CILP2Q8IUL8 1156 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 CPNE9Q8IYJ1 553 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 CLYBLQ8N0X4 340 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 HIPK4Q8NE63 616 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 KLHDC7BQ96G42 594 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 PPP3R2Q96LZ3 170 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 AARSD1Q9BTE6 412 aaKnown RBP8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GSDMCQ9BYG8 508 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 CCDC90BQ9GZT6 254 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 SCN1AP35498 2009 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 CCDC189A1A4V9 331 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 NEMP2A6NFY4 417 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 OR51F1A6NGY5 319 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 C5orf58C9J3I9 102 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 RASSF9O75901 435 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 SSTP61278 116 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 TNK2Q07912 1038 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 SCRN3Q0VDG4 424 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 BST1Q10588 318 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 KCTD19Q17RG1 926 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-211ENST00000413186 MSS51Q4VC12 460 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 IL27RAQ6UWB1 636 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ZCCHC23Q6ZST2 131 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 PAGE2Q7Z2X7 111 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ZC3HC1Q86WB0 502 aaKnown RBP8.4□□□□□ -1.06
SYNE1-211ENST00000413186 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 DPF1Q92782 380 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 HIC2Q96JB3 615 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 PLEKHG4BQ96PX9 1271 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GPR22Q99680 433 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 DPY30Q9C005 99 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 MIEF1Q9NQG6 463 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 ITM2CQ9NQX7 267 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 GULP1Q9UBP9 304 aa8.4□□□□□ -1.06
SYNE1-211ENST00000413186 NPEPPSL1A6NEC2 478 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 AIM2O14862 343 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 FANCGO15287 622 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 SEC22BO75396 215 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 ACTR1BP42025 376 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 ACTR1AP61163 376 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 PLA2G4EQ3MJ16 856 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 XKR6Q5GH73 641 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-211ENST00000413186 BNC2Q6ZN30 1099 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-211ENST00000413186 CBARPQ8N350 705 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-211ENST00000413186 PHF21AQ96BD5 680 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 DTNBP1Q96EV8 351 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 C7orf26Q96N11 449 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 DPEP2Q9H4A9 486 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 COPG2Q9UBF2 871 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 SLC2A6Q9UGQ3 507 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 SLC28A1O00337 649 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 HDAC3O15379 428 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 PI15O43692 258 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 VEGFDO43915 354 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 PLIN3O60664 434 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 RNGTTO60942 597 aaKnown RBP8.4□□□□□ -1.07
SYNE1-211ENST00000413186 ADRB3P13945 408 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 HSD3B1P14060 373 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 LBPP18428 481 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 TBL3Q12788 808 aaKnown RBP8.4□□□□□ -1.07
SYNE1-211ENST00000413186 NFATC2Q13469 925 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 FNDC5Q8NAU1 212 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 KCNJ9Q92806 393 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 GLYATL1Q969I3 302 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 AIF1LQ9BQI0 150 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 MYLK2Q9H1R3 596 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 POPDC3Q9HBV1 291 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 SOHLH2Q9NX45 425 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 MARK1Q9P0L2 795 aa8.4□□□□□ -1.07
SYNE1-211ENST00000413186 PSME2Q9UL46 239 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms