RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 DUSP12Q9UNI6 340 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CFL2Q9Y281 166 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 SPACA6W5XKT8 324 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 BBIP1A8MTZ0 92 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 UPK1BO75841 260 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 C7P10643 843 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CFL1P23528 166 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 MYL9P24844 172 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 MAPK1P28482 360 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 FMO4P31512 558 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 STAT5AP42229 794 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 GMFBP60983 142 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 ARHGAP1Q07960 439 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 LSM12Q3MHD2 195 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 PCID2Q5JVF3 399 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 INTS11Q5TA45 600 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 PLPP4Q5VZY2 271 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RD3Q7Z3Z2 195 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 PROSER1Q86XN7 944 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 METTL25Q8N6Q8 603 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 TRPV1Q8NER1 839 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 MAGEB10Q96LZ2 347 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 HYLS1Q96M11 299 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RBM4BQ9BQ04 359 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CCDC106Q9BWC9 280 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RBM4Q9BWF3 364 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 ZNF416Q9BWM5 594 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 SLC28A3Q9HAS3 691 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 NECTIN3Q9NQS3 549 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 TMEM161AQ9NX61 479 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 IL20Q9NYY1 176 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 NPAP1Q9NZP6 1156 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 COPZ2Q9P299 210 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 ADAM28Q9UKQ2 775 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 FBXL21Q9UKT6 434 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 UGT2A1Q9Y4X1 527 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 MYH7BA7E2Y1 1941 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 TPP1O14773 563 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 NRP2O60462 931 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 PSIP1O75475 530 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RECQL5O94762 991 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CNPP09543 421 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 SMIM18P0DKX4 95 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 PRG2P13727 222 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CLCNKBP51801 687 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 RPS7P62081 194 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 S100A12P80511 92 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CRY1Q16526 586 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 DESI1Q6ICB0 168 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 CGB2Q6NT52 195 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 C10orf107Q8IVU9 208 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 FBXO39Q8N4B4 442 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 TESCQ96BS2 214 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 METTL2AQ96IZ6 378 aaKnown RBP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 FAM83DQ9H4H8 585 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.41□□□□□ -1.06
PBRM1-209ENST00000412587 GLTPQ9NZD2 209 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 TNFRSF10DQ9UBN6 386 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 SRRDQ9UH36 339 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
PBRM1-209ENST00000412587 METTL21EPA6NDL7 271 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 CCDC85CA6NKD9 419 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 AQP12BA6NM10 295 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SNAPC5O75971 98 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 OR5F1O95221 314 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 GUCA1CO95843 209 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 ITGAVP06756 1048 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 FGFR1P11362 822 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 CYP2A7P20853 494 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 ADRA1BP35368 520 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 DGKQP52824 942 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 LILRA4P59901 499 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 GALNT3Q14435 633 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 BCL2A1Q16548 175 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 WSCD2Q2TBF2 565 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 AKIRIN2Q53H80 203 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SLX4IPQ5VYV7 408 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 NANOGP8Q6NSW7 305 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SERPINA13PQ6UXR4 307 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 TAF8Q7Z7C8 310 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 RBM23Q86U06 439 aaKnown RBP8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SPPL2CQ8IUH8 684 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 SIAH1Q8IUQ4 282 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 AQP12AQ8IXF9 295 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 OR8K5Q8NH50 307 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 GRIN3AQ8TCU5 1115 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 S100PBPQ96BU1 408 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 LGMNQ99538 433 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 COPS4Q9BT78 406 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 NPLQ9BXD5 320 aaPredicted RBP8.4□□□□□ -1.06
PBRM1-209ENST00000412587 C1QTNF7Q9BXJ2 289 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 ANKRD60Q9BZ19 345 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 PIF1Q9H611 641 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 EXD2Q9NVH0 621 aa8.4□□□□□ -1.06
PBRM1-209ENST00000412587 INTS10Q9NVR2 710 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms