RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 LRRC38Q5VT99 294 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 HPS6Q86YV9 775 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 RHOT1Q8IXI2 618 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 ENDOVQ8N8Q3 282 aaKnown RBP16.29■□□□□ 0.2
MRPL55-220ENST00000411464 ZNF398Q8TD17 642 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 ADAMTS17Q8TE56 1095 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 CLIP3Q96DZ5 547 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 MFRPQ9BY79 579 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 NLNQ9BYT8 704 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 KIR3DX1Q9H7L2 352 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 LUZP4Q9P127 313 aa16.29■□□□□ 0.2
MRPL55-220ENST00000411464 A6NL46 340 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 MAP3K7O43318 606 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 CEACAM4O75871 244 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 DDAH2O95865 285 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 SLC35G4P0C7Q5 338 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 POLR2CP19387 275 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 NFKB1P19838 968 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 CDH3P22223 829 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 HNRNPH3P31942 346 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 CHRNA4P43681 627 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 ARCN1P48444 511 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 KPNA2P52292 529 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 SLC1A5Q15758 541 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 CAVIN1Q6NZI2 390 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 DUS1LQ6P1R4 473 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 KDELC1Q6UW63 502 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 MED25Q71SY5 747 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 DET1Q7L5Y6 550 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 DSELQ8IZU8 1212 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 TMEM102Q8N9M5 508 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 FDCSPQ8NFU4 85 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 OR2L2Q8NH16 312 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 PRR7Q8TB68 274 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 SMOXQ9NWM0 555 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 DDX56Q9NY93 547 aaKnown RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 SAE1Q9UBE0 346 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-220ENST00000411464 FAM8A1Q9UBU6 413 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 TCFL5Q9UL49 500 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 BTRCQ9Y297 605 aa16.28■□□□□ 0.2
MRPL55-220ENST00000411464 UNC79Q9P2D8 2635 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 A1L4Q6 167 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 SLC9B1P1A6NJY1 282 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 STX7O15400 261 aaKnown RBP16.27■□□□□ 0.2
MRPL55-220ENST00000411464 TNNT1P13805 278 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 HLA-DPA1P20036 260 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 NDUFS1P28331 727 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 CD68P34810 354 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-220ENST00000411464 CA5AP35218 305 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 VAV2P52735 878 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 RRADP55042 308 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 TFDP2Q14188 446 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 PRR30Q53SZ7 412 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-220ENST00000411464 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 LCN10Q6JVE6 187 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 PID1Q7Z2X4 250 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 IPMKQ8NFU5 416 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 PNPLA2Q96AD5 504 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 MRGPRX2Q96LB1 330 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 PPM1MQ96MI6 270 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 SLC7A5P2Q9GIP4 190 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 SYTL2Q9HCH5 934 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 C1GALT1Q9NS00 363 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 GPR83Q9NYM4 423 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-220ENST00000411464 SERTAD3Q9UJW9 196 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
MRPL55-220ENST00000411464 HEBP2Q9Y5Z4 205 aa16.27■□□□□ 0.2
MRPL55-220ENST00000411464 RP1L1Q8IWN7 2480 aaPredicted RBP16.27■□□□□ 0.19
MRPL55-220ENST00000411464 SPTBN1Q01082 2364 aaKnown RBP16.27■□□□□ 0.19
MRPL55-220ENST00000411464 TMEM150CB9EJG8 249 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 F5H423 210 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-220ENST00000411464 MATN2O00339 956 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 DDX3YO15523 660 aaKnown RBP16.26■□□□□ 0.19
MRPL55-220ENST00000411464 AKR1B10O60218 316 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 POLBP06746 335 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 PYGMP11217 842 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 CYP2A7P20853 494 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 PREPP48147 710 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 ITGA1P56199 1179 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 ADCY2Q08462 1091 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 MRPL49Q13405 166 aaKnown RBP16.26■□□□□ 0.19
MRPL55-220ENST00000411464 MFSD7Q6UXD7 560 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 CFAP206Q8IYR0 622 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 FCRL5Q96RD9 977 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 CCM2Q9BSQ5 444 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 NUDT9Q9BW91 350 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 FSD1LQ9BXM9 530 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 SRMSQ9H3Y6 488 aa16.26■□□□□ 0.19
MRPL55-220ENST00000411464 ACTR5Q9H9F9 607 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-220ENST00000411464 GSAPA4D1B5 854 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms