RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZSCAN5CA6NGD5 496 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SPECC1L-ADORA2AF8WAN1 911 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 POLRMTO00411 1230 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 EXOC5O00471 708 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TO15178 435 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SH3BP5O60239 455 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PRDM1O75626 825 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF189O75820 626 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 GLRX3O76003 335 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CLPXO76031 633 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ACTL6BO94805 426 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 BAIAP3O94812 1187 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PMS2P2O95744 297 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TFRCP02786 760 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 GIG44P09565 113 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM157CP0CG43 387 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ESDP10768 282 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PSKH1P11801 424 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 EGR1P18146 543 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 NFKBIAP25963 317 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 POU1F1P28069 291 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 LOXP28300 417 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 GRIA2P42262 883 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RAD52P43351 418 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CSNK1EP49674 416 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PNLIPRP2P54317 469 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ERVPABLB-1P60509 514 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF85Q03923 595 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC20A2Q08357 652 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CD300CQ08708 224 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF816Q0VGE8 651 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 HERC3Q15034 1050 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TEAD2Q15562 447 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 AANATQ16613 207 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 NTRK2Q16620 822 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ME3Q16798 604 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 LETM2Q2VYF4 491 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DEFB109BQ30KR1 87 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 NDUFAF6Q330K2 333 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TIMM50Q3ZCQ8 353 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TMEM255AQ5JRV8 349 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 THEM4Q5T1C6 240 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 UTP14CQ5TAP6 766 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 HES3Q5TGS1 186 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 OTPQ5XKR4 325 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 XRRA1Q6P2D8 792 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC27A1Q6PCB7 646 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF880Q6PDB4 577 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 BHLHB9Q6PI77 547 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 UNQ6190/PRO20217Q6UXQ8 127 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF841Q6ZN19 808 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 MMS22LQ6ZRQ5 1243 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ANKS3Q6ZW76 656 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DDX46Q7L014 1031 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CHST9Q7L1S5 443 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RASGRP2Q7LDG7 609 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PHLDB2Q86SQ0 1253 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RNF180Q86T96 592 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DDX53Q86TM3 631 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 MTDHQ86UE4 582 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 NT5DC4Q86YG4 428 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ABHD12Q8N2K0 398 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DNAAF3Q8N9W5 541 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 KDM1BQ8NB78 822 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 PCYOX1LQ8NBM8 494 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 AGBL3Q8NEM8 1001 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TRPV3Q8NET8 790 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CFAP61Q8NHU2 1237 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 MIPOL1Q8TD10 442 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 KCNG4Q8TDN1 519 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DYRK2Q92630 601 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RBM14Q96PK6 669 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CSPG4P5Q96PW8 444 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SERINC2Q96SA4 455 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZBTB18Q99592 522 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM173AQ9BQD7 235 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TXNDC17Q9BRA2 123 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TEKT3Q9BXF9 490 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 IMPG2Q9BZV3 1241 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 LAT2Q9GZY6 243 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 WDCPQ9H6R7 721 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMYD3Q9H7B4 428 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 METTL17Q9H7H0 456 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 LRRC4Q9HBW1 653 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF160Q9HCG1 818 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 AGO4Q9HCK5 861 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 NECTIN3Q9NQS3 549 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 FSCN3Q9NQT6 498 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RASSF1Q9NS23 344 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF355PQ9NSJ1 428 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 VNN3Q9NY84 501 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 MIS18AQ9NYP9 233 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 OPTCQ9UBM4 332 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC25A10Q9UBX3 287 aaPredicted RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 KLQ9UEF7 1012 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 LIMA1Q9UHB6 759 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 CDC23Q9UJX2 597 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 DRG1Q9Y295 367 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 YIPF1Q9Y548 306 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms