RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 IL6RP08887 468 aaPredicted RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 SPARCP09486 303 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 WARSP23381 471 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 NFKBIAP25963 317 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 GJC1P36383 396 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 CPOXP36551 454 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 MAGEA11P43364 429 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 TPTEP56180 551 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 SNX16P57768 344 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 RPL10AP62906 217 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 TNNC1P63316 161 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 PRAMEP78395 509 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 NHLH1Q02575 133 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 TEAD2Q15562 447 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 MLF2Q15773 248 aaPredicted RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 SOWAHAQ2M3V2 549 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 ZNF699Q32M78 642 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 BEAN1Q3B7T3 259 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 CFAP221Q4G0U5 840 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 ZCWPW2Q504Y3 356 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 FAM78AQ5JUQ0 283 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 CDC73Q6P1J9 531 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 KIAA1324Q6UXG2 1013 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 Q6ZSN1 163 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 DNAJB7Q7Z6W7 309 aaPredicted RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 SCN4BQ8IWT1 228 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 SIRT6Q8N6T7 355 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 TMEM105Q8N8V8 129 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 SRFBP1Q8NEF9 429 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 PRSS33Q8NF86 280 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 FKBP10Q96AY3 582 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 R3HDM4Q96D70 268 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 PERPQ96FX8 193 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 MSANTD3Q96H12 275 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 PIP5K1AQ99755 562 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 KXD1Q9BQD3 176 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 SYT15Q9BQS2 421 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 RPP25Q9BUL9 199 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 TEX101Q9BY14 249 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 EDEM3Q9BZQ6 932 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 CTDSP1Q9GZU7 261 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 SLITRK6Q9H5Y7 841 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 ZFP14Q9HCL3 533 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 TLR8Q9NR97 1041 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 DKK2Q9UBU2 259 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 KLQ9UEF7 1012 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 HOOK1Q9UJC3 728 aaKnown RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 CDH9Q9ULB4 789 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 MYRFQ9Y2G1 1151 aa6.24□□□□□ -1.41
LSM5-203ENST00000409782 NUP210Q8TEM1 1887 aaPredicted RBP6.24□□□□□ -1.41
LSM5-203ENST00000409782 COL4A2P08572 1712 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 GVINP1Q7Z2Y8 2422 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 NOL4O94818 638 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 SMC2O95347 1197 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 TUBB4AP04350 444 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ERBB2P04626 1255 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 CYP4B1P13584 511 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 P4HA1P13674 534 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ZNF8P17098 575 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 PRPH2P23942 346 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 NR2F2P24468 414 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 TBXAS1P24557 533 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 ACAT1P24752 427 aaKnown RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 DDX6P26196 483 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM5-203ENST00000409782 GABRR2P28476 465 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 MAGEA9P43362 315 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 STARD6P59095 220 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 GPC5P78333 572 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 OLR1P78380 273 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ARHGAP8P85298 464 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 CCDC15Q0P6D6 951 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ZXDCQ2QGD7 858 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 EDRF1Q3B7T1 1238 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 GXYLT1Q4G148 440 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 SLC9B1Q4ZJI4 515 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 FAM171BQ6P995 826 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 VSTM1Q6UX27 236 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 INTS8Q75QN2 995 aaKnown RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 SPATA2LQ8IUW3 424 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 LNX2Q8N448 690 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 WDTC1Q8N5D0 677 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ENGASEQ8NFI3 743 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 CNOT9Q92600 299 aaKnown RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 TAF4BQ92750 862 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 MYLPFQ96A32 169 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 GSDMAQ96QA5 445 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 PRR25Q96S07 402 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 MMS19Q96T76 1030 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ELOVL4Q9GZR5 314 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 SNX25Q9H3E2 840 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 TASP1Q9H6P5 420 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 KIF9Q9HAQ2 790 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ZNF334Q9HCZ1 680 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 AKIP1Q9NQ31 210 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 TRPV5Q9NQA5 729 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 GAR1Q9NY12 217 aaKnown RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 UXTQ9UBK9 157 aaPredicted RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 RIF1Q5UIP0 2472 aaKnown RBP6.23□□□□□ -1.41
LSM5-203ENST00000409782 PTPRDP23468 1912 aa6.23□□□□□ -1.41
LSM5-203ENST00000409782 ATP8B3O60423 1300 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms