RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CD48P09326 243 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 MMP9P14780 707 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 MFAP4P55083 255 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 CDH11P55287 796 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 C14orf177Q52M58 125 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 GCNT6Q5T4J0 391 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 ZNF790Q6PG37 636 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 ISCA2Q86U28 154 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 L3MBTL4Q8NA19 623 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 ADAD2Q8NCV1 583 aaKnown RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 DAZLQ92904 295 aaKnown RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 DACH2Q96NX9 599 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 MAK16Q9BXY0 300 aaKnown RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 PELI2Q9HAT8 420 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 CHMP1AQ9HD42 196 aaPredicted RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 AMACRQ9UHK6 382 aa3.78□□□□□ -1.81
PMS1-203ENST00000409593 LAS1LQ9Y4W2 734 aaKnown RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 SPIN1Q9Y657 262 aaPredicted RBP3.78□□□□□ -1.81
PMS1-203ENST00000409593 LRRC72A6NJI9 287 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 CDRT15L2A8MXV6 281 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 MITFO75030 526 aaPredicted RBP3.77□□□□□ -1.81
PMS1-203ENST00000409593 LDLRP01130 860 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 ACP2P11117 423 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 CAPN3P20807 821 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 GNB1P62873 340 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 IRF3Q14653 427 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 FAM98BQ52LJ0 330 aaKnown RBP3.77□□□□□ -1.81
PMS1-203ENST00000409593 MFSD6Q6ZSS7 791 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 GPALPP1Q8IXQ4 340 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 TMEM143Q96AN5 459 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 FAM81BQ96LP2 452 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 SYNCQ9H7C4 482 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 KCNJ14Q9UNX9 436 aa3.77□□□□□ -1.81
PMS1-203ENST00000409593 EXO1Q9UQ84 846 aaKnown RBP3.77□□□□□ -1.81
PMS1-203ENST00000409593 ITIH6Q6UXX5 1313 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 STK36Q9NRP7 1315 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 MAGEB17A8MXT2 336 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 B4DLN1 442 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 CSPG5O95196 566 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 LIFP15018 202 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 PRLRP16471 622 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 MRPL12P52815 198 aaKnown RBP3.76□□□□□ -1.81
PMS1-203ENST00000409593 GEMIN4P57678 1058 aaKnown RBP3.76□□□□□ -1.81
PMS1-203ENST00000409593 TMF1P82094 1093 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 MRPS5P82675 430 aaKnown RBP3.76□□□□□ -1.81
PMS1-203ENST00000409593 C4orf50Q6ZRC1 276 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 PLD3Q8IV08 490 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 DNAJC22Q8N4W6 341 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 MTERF3Q96E29 417 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 SLC47A1Q96FL8 570 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 TRAF4Q9BUZ4 470 aaPredicted RBP3.76□□□□□ -1.81
PMS1-203ENST00000409593 HHATLQ9HCP6 504 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 SIX2Q9NPC8 291 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 ZNF215Q9UL58 517 aaPredicted RBP3.76□□□□□ -1.81
PMS1-203ENST00000409593 SLC7A7Q9UM01 511 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 RABGAP1Q9Y3P9 1069 aa3.76□□□□□ -1.81
PMS1-203ENST00000409593 PRSS51A0A1B0GVH4 220 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 GNB3P16520 340 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 PSMB10P40306 273 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 SLC15A1P46059 708 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 SUOXP51687 545 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 MC1RQ01726 317 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 AIMP2Q13155 320 aaKnown RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 KIAA1644Q3SXP7 199 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 ARHGEF16Q5VV41 709 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 INTS8Q75QN2 995 aaKnown RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 MCEMP1Q8IX19 187 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 ZNF843Q8N446 348 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 TRIM58Q8NG06 486 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 WDR20Q8TBZ3 569 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 SLC22A12Q96S37 553 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 RTN4RQ9BZR6 473 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 COQ3Q9NZJ6 369 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 NPAP1Q9NZP6 1156 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 MED19A0JLT2 244 aaPredicted RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 ELOVL7A1L3X0 281 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 FSD2A1L4K1 749 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 SLC22A2O15244 555 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 DOK2O60496 412 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 RNF224P0DH78 156 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 RXRGP48443 463 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 KCNJ10P78508 379 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 GTDC1Q4AE62 458 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 FFAR4Q5NUL3 377 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 CORO6Q6QEF8 472 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 AACSQ86V21 672 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 C17orf53Q8N3J3 647 aaPredicted RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 ZFAND2BQ8WV99 257 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 TMEM190Q8WZ59 177 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 CCDC34Q96HJ3 373 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 MYADMQ96S97 322 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 BARD1Q99728 777 aaKnown RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 ABHD6Q9BV23 337 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 HAUS2Q9NVX0 235 aa3.75□□□□□ -1.81
PMS1-203ENST00000409593 MRPS28Q9Y2Q9 187 aaKnown RBP3.75□□□□□ -1.81
PMS1-203ENST00000409593 LNP1A1A4G5 178 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 DNM1LO00429 736 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 PSMD14O00487 310 aa3.74□□□□□ -1.81
PMS1-203ENST00000409593 CTDSP2O14595 271 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms