RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 KLHL3Q9UH77 587 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 RIMKLBQ9ULI2 386 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 GUCA1BQ9UMX6 200 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 PACSIN2Q9UNF0 486 aaPredicted RBP14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 KCTD3Q9Y597 815 aa14.22□□□□□ -0.13
NIF3L1-205ENST00000409588 MROH6A6NGR9 719 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 MATN2O00339 956 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 RASSF9O75901 435 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 MC4RP32245 332 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 PPARGP37231 505 aaPredicted RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 CACNG1Q06432 222 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 RPS6KA1Q15418 735 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 MEI1Q5TIA1 1274 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 CACHD1Q5VU97 1274 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 LYPLAL1Q5VWZ2 237 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 KIAA1614Q5VZ46 1190 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 SLC13A5Q86YT5 568 aaPredicted RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 CFAP206Q8IYR0 622 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 OR13C4Q8NGS5 318 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 HM13Q8TCT9 377 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 PEX13Q92968 403 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 SLC45A3Q96JT2 553 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 FAM117AQ9C073 453 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 PDE7BQ9NP56 450 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 HOMER3Q9NSC5 361 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 DRG1Q9Y295 367 aaKnown RBP14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 CAPN6Q9Y6Q1 641 aa14.21□□□□□ -0.13
NIF3L1-205ENST00000409588 FASNP49327 2511 aaKnown RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 ZNF891A8MT65 544 aaPredicted RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 LIASO43766 372 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 STK17BO94768 372 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 SUN1O94901 812 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 RECKO95980 971 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 CCDC175P0C221 793 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 CCNYL3P0C7X3 344 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 FGF5P12034 268 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 ACRV1P26436 265 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 NSG1P42857 185 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 GFERP55789 205 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 ACY1Q03154 408 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 FOXM1Q08050 763 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 SPARCL1Q14515 664 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 KRT33BQ14525 404 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 PLCL1Q15111 1095 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 OASLQ15646 514 aaKnown RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 CCNG2Q16589 344 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 ARMC6Q6NXE6 501 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 IRGCQ6NXR0 463 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 DRICH1Q6PGQ1 229 aaPredicted RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 CERS6Q6ZMG9 384 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 OOSP2Q86WS3 158 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 DNAAF3Q8N9W5 541 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 OR8K5Q8NH50 307 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 SGSM3Q96HU1 749 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 SLC41A2Q96JW4 573 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 C12orf66Q96MD2 445 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 INSM2Q96T92 566 aaPredicted RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 SLC12A9Q9BXP2 914 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 KIR3DX1Q9H7L2 352 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 IMP3Q9NV31 184 aaKnown RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 HRASLS2Q9NWW9 162 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 PSMD13Q9UNM6 376 aa14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 R3HDM2Q9Y2K5 976 aaKnown RBP14.2□□□□□ -0.14
NIF3L1-205ENST00000409588 HEATR9A2RTY3 570 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 OR5K3A6NET4 321 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 B8ZZF3 427 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 E7EVH7 732 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 GPR39O43194 453 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 MAP3K7O43318 606 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 SGTAO43765 313 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 C1QL1O75973 258 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 ADRA1DP25100 572 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 CA5AP35218 305 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 LMAN1P49257 510 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 GDF10P55107 478 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 HSD11B2P80365 405 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 TMPRSS15P98073 1019 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 PRKAA1Q13131 559 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 OLIG2Q13516 323 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 ITIH4Q14624 930 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 ZRANB3Q5FWF4 1079 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 C6orf15Q6UXA7 325 aaPredicted RBP14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 DET1Q7L5Y6 550 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 TAS2R42Q7RTR8 314 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 VASH2Q86V25 355 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 PPP1R3BQ86XI6 285 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 CCDC89Q8N998 374 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 ACVR1CQ8NER5 493 aa14.19□□□□□ -0.14
NIF3L1-205ENST00000409588 TRIM58Q8NG06 486 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms