RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 VWA5B1Q5TIE3 1220 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 SLC6A19Q695T7 634 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 HIST2H2BCQ6DN03 193 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 FAM199XQ6PEV8 388 aaPredicted RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 CYP4V2Q6ZWL3 525 aaPredicted RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 BZW1Q7L1Q6 419 aaKnown RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 NT5DC3Q86UY8 548 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 ZADH2Q8N4Q0 377 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 NIPA2Q8N8Q9 360 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 ARRDC2Q8TBH0 407 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 HDAC11Q96DB2 347 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 RNF31Q96EP0 1072 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 VPS50Q96JG6 964 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 VPS35Q96QK1 796 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 DHRS4Q9BTZ2 278 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 NLNQ9BYT8 704 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 TRIM7Q9C029 511 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 CHST8Q9H2A9 424 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 TRABDQ9H4I3 376 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 ARFGAP3Q9NP61 516 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 MLXIPLQ9NP71 852 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 IMP3Q9NV31 184 aaKnown RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 AIPL1Q9NZN9 384 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
LSM5-202ENST00000409292 SHOC2Q9UQ13 582 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 ZNF711Q9Y462 761 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 HEBP2Q9Y5Z4 205 aa7.57□□□□□ -1.2
LSM5-202ENST00000409292 BOD1L1Q8NFC6 3051 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 IGHV5-51A0A0C4DH38 117 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 OR5K3A6NET4 321 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ANKUB1A6NFN9 424 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PRLP01236 227 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 RALBP11234 206 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 FOLR1P15328 257 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ZFXP17010 805 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 CDH3P22223 829 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 IL4RP24394 825 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ELAVL4P26378 380 aaKnown RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 AKT1P31749 480 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 DCTP40126 519 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PRKCIP41743 596 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PREPP48147 710 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 RPS18P62269 152 aaKnown RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 TPM4P67936 248 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 CDK18Q07002 472 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 NIPAL4Q0D2K0 466 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 AP1B1Q10567 949 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 TMEM115Q12893 351 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 MRPL49Q13405 166 aaKnown RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 KCNAB1Q14722 419 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PDK1Q15118 436 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 RPE65Q16518 533 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PCSK7Q16549 785 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ZNF648Q5T619 568 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 CPZQ66K79 652 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 NCBP2-AS2Q69YL0 99 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ZNF571Q7Z3V5 609 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 TMC3Q7Z5M5 1100 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 GPR135Q8IZ08 494 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ENDOVQ8N8Q3 282 aaKnown RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 GLIS1Q8NBF1 620 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 GPR26Q8NDV2 337 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 FDCSPQ8NFU4 85 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 CPLX3Q8WVH0 158 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 SMIM14Q96QK8 99 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 WDR24Q96S15 920 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 MAP3K3Q99759 626 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ISCUQ9H1K1 167 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ACTR5Q9H9F9 607 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 HACD3Q9P035 362 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 LUZP4Q9P127 313 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 SEMA5BQ9P283 1151 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 SLC23A2Q9UGH3 650 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 TCFL5Q9UL49 500 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 ACSL5Q9ULC5 683 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 B3GNT3Q9Y2A9 372 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PKP3Q9Y446 797 aa7.56□□□□□ -1.2
LSM5-202ENST00000409292 PCYT1BQ9Y5K3 369 aaPredicted RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 COPG1Q9Y678 874 aaKnown RBP7.56□□□□□ -1.2
LSM5-202ENST00000409292 E7EQ34 232 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 KCNK1O00180 336 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
LSM5-202ENST00000409292 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.22e-12■■□□□ 12.7
LSM5-202ENST00000409292 HNRNPRO43390 633 aaKnown RBP7.55□□□□□ -1.2
LSM5-202ENST00000409292 OIP5O43482 229 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 MTX2O75431 263 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 POP7O75817 140 aaKnown RBP7.55□□□□□ -1.2
LSM5-202ENST00000409292 CEACAM4O75871 244 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 TIAF1O95411 115 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 NDST3O95803 873 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 THBS1P07996 1170 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 MTHFD1P11586 935 aaKnown RBP7.55□□□□□ -1.2
LSM5-202ENST00000409292 BRAFP15056 766 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 BPIP17213 487 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 MSH3P20585 1137 aa7.55□□□□□ -1.2
LSM5-202ENST00000409292 TNFRSF8P28908 595 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms