RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ADCY2Q08462 1091 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 ZBTB17Q13105 803 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 ZXDCQ2QGD7 858 aaPredicted RBP16.22■□□□□ 0.19
CHMP3-203ENST00000409225 ZNF789Q5FWF6 425 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 CARFQ8N187 725 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 C12orf66Q96MD2 445 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 INSM2Q96T92 566 aaPredicted RBP16.22■□□□□ 0.19
CHMP3-203ENST00000409225 WWP1Q9H0M0 922 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 SLC24A2Q9UI40 661 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 CSMD2Q7Z408 3487 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 OR2AG2A6NM03 316 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 AURKAO14965 403 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 KLF7O75840 302 aaPredicted RBP16.21■□□□□ 0.19
CHMP3-203ENST00000409225 IPO13O94829 963 aaKnown RBP16.21■□□□□ 0.19
CHMP3-203ENST00000409225 HLA-DPA1P20036 260 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 AGXTP21549 392 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 PREPP48147 710 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 SSPNQ14714 243 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 ATP13A4Q4VNC1 1196 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 MLIPQ5VWP3 458 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 TMEM220Q6QAJ8 160 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 FJX1Q86VR8 437 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 CNTD1Q8N815 330 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 RASGEF1AQ8N9B8 481 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 BRSK1Q8TDC3 778 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 GRHL3Q8TE85 626 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 CEP41Q9BYV8 373 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 MYO6Q9UM54 1294 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 PTRH2Q9Y3E5 179 aaKnown RBP16.21■□□□□ 0.19
CHMP3-203ENST00000409225 SPO11Q9Y5K1 396 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 ZFHX3Q15911 3703 aa16.21■□□□□ 0.19
CHMP3-203ENST00000409225 ZNF749O43361 778 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 IGHEP01854 428 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 MX2P20592 715 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 ITGA3P26006 1051 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 HADHAP40939 763 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 FOLR3P41439 243 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 LMAN1P49257 510 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 ARSEP51690 589 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 SLC10A2Q12908 348 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 PRKAA1Q13131 559 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 HIF1AQ16665 826 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 E4F1Q66K89 784 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 NIPA2Q8N8Q9 360 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 OR4E2Q8NGC2 313 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 HDAC11Q96DB2 347 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 WDR77Q9BQA1 342 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 DPH2Q9BQC3 489 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 ZCCHC2Q9C0B9 1178 aaKnown RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 KIR3DX1Q9H7L2 352 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 CBX8Q9HC52 389 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 C1GALT1Q9NS00 363 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 P4HTMQ9NXG6 502 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 COPG2Q9UBF2 871 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 FAM8A1Q9UBU6 413 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 SERTAD3Q9UJW9 196 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 ANAPC7Q9UJX3 599 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 ITGB1BP2Q9UKP3 347 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 POMT2Q9UKY4 750 aa16.2■□□□□ 0.18
CHMP3-203ENST00000409225 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
CHMP3-203ENST00000409225 SETD2Q9BYW2 2564 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 HEATR9A2RTY3 570 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 GSAPA4D1B5 854 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 E7EQ34 232 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 GPR39O43194 453 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A9O60656 530 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 EDN3P14138 238 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A6P19224 532 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A1P22309 533 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A4P22310 534 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 METRNLQ641Q3 311 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 ZNF385CQ66K41 422 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 B4GALNT4Q76KP1 1039 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 BEND7Q8N7W2 519 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 KCTD6Q8NC69 237 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 IMP4Q96G21 291 aaKnown RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 LURAP1Q96LR2 239 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 TRAPPC9Q96Q05 1148 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 KLHL25Q9H0H3 589 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A7Q9HAW7 530 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A10Q9HAW8 530 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 UGT1A8Q9HAW9 530 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 SYTL2Q9HCH5 934 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 IP6K2Q9UHH9 426 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 DNMT3AQ9Y6K1 912 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-203ENST00000409225 CELSR1Q9NYQ6 3014 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 SEC16AO15027 2179 aa16.19■□□□□ 0.18
CHMP3-203ENST00000409225 CBSLP0DN79 551 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ST6GAL1P15907 406 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 CBSP35520 551 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 FOXL2P58012 376 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 IFI35P80217 286 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms