RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
COL23A1-202ENST00000407622 CIPCQ9C0C6 399 aa16.3■□□□□ 0.2
COL23A1-202ENST00000407622 CARS2Q9HA77 564 aaKnown RBP16.3■□□□□ 0.2
COL23A1-202ENST00000407622 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
COL23A1-202ENST00000407622 TMCO1Q9UM00 188 aa16.3■□□□□ 0.2
COL23A1-202ENST00000407622 ANAPC1Q9H1A4 1944 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 UPK1AO00322 258 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PRMT5O14744 637 aaPredicted RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PFDN6O15212 129 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TAPBPO15533 448 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 FFAR2O15552 330 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PCNAP12004 261 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 CCL5P13501 91 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TCF3P15923 654 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 ADARP55265 1226 aaKnown RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 NAA20P61599 178 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 CACNG1Q06432 222 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PTGR1Q14914 329 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 AARS2Q5JTZ9 985 aaKnown RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 CGREF1Q99674 301 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 ELAC1Q9H777 363 aaKnown RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TIMMDC1Q9NPL8 285 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 FARSBQ9NSD9 589 aaKnown RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PKP3Q9Y446 797 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 hCG_2014768A0A024R1R8 64 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 FFAR3O14843 346 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 GPR42O15529 346 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TBL1XO60907 577 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 UMPSP11172 480 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 COL6A1P12109 1028 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 SELPP16109 830 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 GKP32189 559 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 RHOAP61586 193 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PLD1Q13393 1074 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PMS2P3Q13401 168 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 PHKG1Q16816 387 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 AASDHQ4L235 1098 aaPredicted RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 SERPINA9Q86WD7 417 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 KLF16Q9BXK1 252 aaPredicted RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 TUBA8Q9NY65 449 aaPredicted RBP16.29■□□□□ 0.2
COL23A1-202ENST00000407622 VAPAQ9P0L0 249 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 CCL27Q9Y4X3 112 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
COL23A1-202ENST00000407622 DFNA5O60443 496 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 STT3AP46977 705 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 RPL38P63173 70 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ZBED5Q49AG3 693 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 LRRC23Q53EV4 343 aaPredicted RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 SLC8B1Q6J4K2 584 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 USP51Q70EK9 711 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 FAM126BQ8IXS8 530 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ADAMTS16Q8TE57 1224 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 C12orf43Q96C57 262 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 SLC22A12Q96S37 553 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 APOL5Q9BWW9 433 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 RETREG1Q9H6L5 497 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 VPS51Q9UID3 782 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PTBP2Q9UKA9 531 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PCDHB3Q9Y5E6 796 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 H0Y626 953 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 B4GAT1O43505 415 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PRAMEF1O95521 474 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 HMGCLP35914 325 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ADARB1P78563 741 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 KIAA0040Q15053 153 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PTRHD1Q6GMV3 140 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ABRAXAS1Q6UWZ7 409 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PATL1Q86TB9 770 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 ADAMTSL2Q86TH1 951 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PROSER1Q86XN7 944 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 LRRC43Q8N309 656 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PDLIM5Q96HC4 596 aaKnown RBP16.28■□□□□ 0.2
COL23A1-202ENST00000407622 C17orf80Q9BSJ5 609 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 FEM1AQ9BSK4 669 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 DCUN1D5Q9BTE7 237 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 IKZF5Q9H5V7 419 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 CD320Q9NPF0 282 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 PFDN4Q9NQP4 134 aa16.28■□□□□ 0.2
COL23A1-202ENST00000407622 SCN5AQ14524 2016 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 A8MX80 341 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 C7P10643 843 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 CDH1P12830 882 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 UGT1A1P22309 533 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 UGT1A4P22310 534 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 UGT1A3P35503 534 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 UGT1A5P35504 534 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 GGT5P36269 586 aa16.27■□□□□ 0.2
COL23A1-202ENST00000407622 HMGCS1Q01581 520 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms