RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KCNK5O95279 499 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 PENKP01210 267 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 PTMSP20962 102 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 KCNA5P22460 613 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 HOXD3P31249 432 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 TCF7P36402 384 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 RFX2P48378 723 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 AMTP48728 403 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 MXI1P50539 228 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 SRSF4Q08170 494 aaKnown RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 DSC1Q08554 894 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRAF2Q12933 501 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 PTK6Q13882 451 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 MELKQ14680 651 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ASIC2Q16515 512 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ATP13A5Q4VNC0 1218 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 KCNT1Q5JUK3 1230 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 FNBP1LQ5T0N5 605 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 SFMBT2Q5VUG0 894 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 BRAT1Q6PJG6 821 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 MOXD1Q6UVY6 613 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 C11orf57Q6ZUT1 292 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 IRF2BP2Q7Z5L9 587 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 PIM3Q86V86 326 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 TBC1D16Q8TBP0 767 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 TAS1R2Q8TE23 839 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 UTP15Q8TED0 518 aaKnown RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 DENND1AQ8TEH3 1009 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 DDB2Q92466 427 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLAMF9Q96A28 289 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 LRRC3BQ96PB8 259 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 MRPL9Q9BYD2 267 aaKnown RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ST6GALNAC4Q9H4F1 302 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 PCDH9Q9HC56 1237 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 POT1Q9NUX5 634 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 HIF1ANQ9NWT6 349 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 MTRRQ9UBK8 725 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 E9PCH4 1651 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF804BA4D1E1 1349 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ASTN2O75129 1339 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 NPC1L1Q9UHC9 1359 aa4.65□□□□□ -1.66
HMGB3P18-201ENST00000406327 MROH1Q8NDA8 1641 aa4.65□□□□□ -1.66
HMGB3P18-201ENST00000406327 NPATQ14207 1427 aa4.65□□□□□ -1.66
HMGB3P18-201ENST00000406327 TET3O43151 1660 aa4.65□□□□□ -1.66
HMGB3P18-201ENST00000406327 MYOM2P54296 1465 aa4.65□□□□□ -1.66
HMGB3P18-201ENST00000406327 A0A087WV48 116 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 A0A0B4J293 547 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 CGB1A6NKQ9 187 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR6C75A6NL08 312 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 J3KR12 359 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC7A4O43246 635 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PLPP2O43688 288 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 SERPINI2O75830 405 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 CELF2O95319 508 aaKnown RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 LCATP04180 440 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRF1P14222 555 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 DNASE1P24855 282 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 HRH2P25021 359 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PSMA3P25788 255 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 ITGB8P26012 769 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPP2R1AP30153 589 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 TLX1P31314 330 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 LIMK1P53667 647 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 RBPJQ06330 500 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPIGQ13427 754 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 MTX3Q5HYI7 312 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 C18orf63Q68DL7 685 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 TEX38Q6PEX7 206 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM198BQ6UWH4 519 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 SUSD1Q6UWL2 747 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PPP1R21Q6ZMI0 780 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF534Q76KX8 674 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 GLRX5Q86SX6 157 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 PIP4P1Q86T03 277 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 NRROSQ86YC3 692 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 TIGD4Q8IY51 512 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 SLC5A8Q8N695 610 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR14A16Q8NHC5 309 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 BBS10Q8TAM1 723 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 WDR20Q8TBZ3 569 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 NXNL1Q96CM4 212 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 MTBPQ96DY7 904 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 LINC00615Q96LM1 132 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF558Q96NG5 402 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 GPATCH1Q9BRR8 931 aaKnown RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 ABHD6Q9BV23 337 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 RBM38Q9H0Z9 239 aaKnown RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 DDX43Q9NXZ2 648 aaKnown RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 AGO1Q9UL18 857 aaKnown RBP4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 KLHL20Q9Y2M5 609 aa4.65□□□□□ -1.67
HMGB3P18-201ENST00000406327 CLTCL1P53675 1640 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 MADDQ8WXG6 1647 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 NRXN1Q9ULB1 1477 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 POLR1AO95602 1720 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 TMEM189-UBE2V1I3L0A0 370 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 J3QR06 171 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 SOCS6O14544 535 aa4.64□□□□□ -1.67
HMGB3P18-201ENST00000406327 MED24O75448 989 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms