RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZNF460Q14592 562 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 SYTL3Q4VX76 610 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 METRNLQ641Q3 311 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 ASCL5Q7RTU5 278 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 TDRPQ86YL5 185 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 GATAD2AQ86YP4 633 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC25A45Q8N413 288 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 ZBTB2Q8N680 514 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 RXFP3Q9NSD7 469 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 TRMT6Q9UJA5 497 aaKnown RBP32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 KPNA5O15131 536 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 SNX2O60749 519 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 APOA4P06727 396 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 CD9P21926 228 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 CNTFP26441 200 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 RPL10P27635 214 aaKnown RBP32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 SEPT7Q16181 437 aaKnown RBP32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 UGT3A1Q6NUS8 523 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 ASZ1Q8WWH4 475 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 ROPN1BQ9BZX4 212 aaPredicted RBP32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 ROPN1Q9HAT0 212 aaPredicted RBP32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 TBC1D29Q9UFV1 150 aa32.64■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC5A10A0PJK1 596 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 LIN7AO14910 233 aaPredicted RBP32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 YKT6O15498 198 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 KRT37O76014 449 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 SKIV2L2P42285 1042 aaKnown RBP32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 CLCNKAP51800 687 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 ZNF844Q08AG5 666 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 PDAP1Q13442 181 aaKnown RBP32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 LGSNQ5TDP6 509 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 CMC1Q7Z7K0 106 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 GKN2Q86XP6 184 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 SAP25Q8TEE9 199 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 INPP5DQ92835 1189 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 PRDM8Q9NQV8 689 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 TAAR2Q9P1P5 351 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 DOLKQ9UPQ8 538 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 CDYLQ9Y232 598 aa32.63■■■□□ 2.81
CSNK1E-204ENST00000403904 TRIM49D1C9J1S8 452 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 YY2O15391 372 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 CDH16O75309 829 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 GPC4O75487 556 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 SNRPAP09012 282 aaKnown RBP32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 STMN1P16949 149 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 IDSP22304 550 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 PDHA2P29803 388 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 TMED2Q15363 201 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 PAQR3Q6TCH7 311 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 VRK3Q8IV63 474 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 TMEM159Q96B96 161 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 EURLQ9NYK6 297 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 PSMD13Q9UNM6 376 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 LMO7DNF2Z398 122 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 PHGDHO43175 533 aaKnown RBP32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 DEFB133Q30KQ1 61 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 PLEKHS1Q5SXH7 462 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 FAM46DQ8NEK8 389 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 TSPAN17Q96FV3 270 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 EDEM2Q9BV94 578 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 TMEM109Q9BVC6 243 aa32.62■■■□□ 2.81
CSNK1E-204ENST00000403904 IQANK1A0A1B0GTG1 560 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 EML2O95834 649 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 ALDOAP04075 364 aaKnown RBP32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 RASA2Q15283 850 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 ACSBG2Q5FVE4 666 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 PRR23CQ6ZRP0 262 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 KANSL1Q7Z3B3 1105 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 CPNE9Q8IYJ1 553 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 CYP4X1Q8N118 509 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 KLHL42Q9P2K6 505 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 TSR3Q9UJK0 312 aaKnown RBP32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 ACSL5Q9ULC5 683 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 WDR37Q9Y2I8 494 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 CSNK1G3Q9Y6M4 447 aa32.61■■■□□ 2.81
CSNK1E-204ENST00000403904 PDZK1P1A8MUH7 402 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 CDX4O14627 284 aaPredicted RBP32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 FFAR2O15552 330 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 ANXA6P08133 673 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 RAB10P61026 200 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 ZKSCAN8Q15776 578 aaPredicted RBP32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 TTLL9Q3SXZ7 439 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 TMEM207Q6UWW9 146 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 LRIG3Q6UXM1 1119 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 SDR16C5Q8N3Y7 309 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 DPEP2Q9H4A9 486 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 GPAMQ9HCL2 828 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 SNX15Q9NRS6 342 aa32.6■■■□□ 2.81
CSNK1E-204ENST00000403904 NEMP2A6NFY4 417 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 TPP1O14773 563 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 SLCO2B1O94956 709 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 RPA4Q13156 261 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 KRT71Q3SY84 523 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 CEP85LQ5SZL2 805 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 RAPH1Q70E73 1250 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 HDXQ7Z353 690 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 SPDYE1Q8NFV5 336 aaPredicted RBP32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 MTBPQ96DY7 904 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 OR52A5Q9H2C5 316 aa32.59■■■□□ 2.81
CSNK1E-204ENST00000403904 DNAAF2Q9NVR5 837 aaKnown RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms