RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 KCTD16Q68DU8 428 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 METTL2BQ6P1Q9 378 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 KLC3Q6P597 504 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TTC23LQ6PF05 361 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 CDHR3Q6ZTQ4 885 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 RAPH1Q70E73 1250 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 ISCA2Q86U28 154 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 C4orf33Q8N1A6 199 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SLC22A18ASQ8N1D0 253 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 PLD6Q8N2A8 252 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 ZNF473Q8WTR7 871 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 ANKRD49Q8WVL7 239 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 KLHDC7BQ96G42 594 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TSNARE1Q96NA8 513 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 VPS11Q9H270 941 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 COG4Q9H9E3 785 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TM9SF3Q9HD45 589 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 RUVBL2Q9Y230 463 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 TMEM202A6NGA9 273 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 IQCF5A8MTL0 148 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 MAP3K13O43283 966 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 HRO43593 1189 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 KERAO60938 352 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 MTX2O75431 263 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 PSIP1O75475 530 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 ASMTLO95671 621 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 WNT1P04628 370 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SBK3P0C264 359 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 CCDC166P0CW27 439 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 VCLP18206 1134 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 RPA3P35244 121 aaPredicted RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 PXNP49023 591 aaPredicted RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 CLDN2P57739 230 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 NXPH1P58417 271 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 DNAJB13P59910 316 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SRP54P61011 504 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 EIF2B5Q13144 721 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 FZD2Q14332 565 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 ACSBG2Q5FVE4 666 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 UNC5DQ6UXZ4 953 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 ZYG11AQ6WRX3 759 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 RGS9BPQ6ZS82 235 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OTOAQ7RTW8 1153 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TRIM74Q86UV6 250 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 AMZ2Q86W34 360 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OR13H1Q8NG92 308 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OR6Y1Q8NGX8 325 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 EEF1AKMT1Q8WVE0 214 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 KCTD4Q8WVF5 259 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OR1E3Q8WZA6 343 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SKA1Q96BD8 255 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 NXNL1Q96CM4 212 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SLC6A18Q96N87 628 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OR2M4Q96R27 311 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 CCT8L2Q96SF2 557 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 OR52A5Q9H2C5 316 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 MRPL46Q9H2W6 279 aaKnown RBP6.72□□□□□ -1.33
USP16-203ENST00000399975 KLQ9UEF7 1012 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 SUFUQ9UMX1 484 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 TMEM98Q9Y2Y6 226 aa6.72□□□□□ -1.33
USP16-203ENST00000399975 PCDH15Q96QU1 1955 aa6.71□□□□□ -1.33
USP16-203ENST00000399975 TLR4O00206 839 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 H2AFYO75367 372 aaKnown RBP6.71□□□□□ -1.34
USP16-203ENST00000399975 RASGRP1O95267 797 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 TRIM16O95361 564 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 TNFP01375 233 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 THEGLP0DJG4 465 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ACADLP28330 430 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 RIPK1Q13546 671 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ZNF460Q14592 562 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ALG11Q2TAA5 492 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 TPRG1LQ5T0D9 272 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 N4BP2L1Q5TBK1 243 aaPredicted RBP6.71□□□□□ -1.34
USP16-203ENST00000399975 LYSMD4Q5XG99 296 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 CAPRIN2Q6IMN6 1127 aaKnown RBP6.71□□□□□ -1.34
USP16-203ENST00000399975 TSSK4Q6SA08 328 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 DET1Q7L5Y6 550 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ADAMTSL2Q86TH1 951 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 GALNT13Q8IUC8 556 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 MYO1HQ8N1T3 1032 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 STAG3L4Q8TBR4 150 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ASB11Q8WXH4 323 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ELMO1Q92556 727 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 LINGO1Q96FE5 620 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 HSPA12BQ96MM6 686 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ATOH8Q96SQ7 321 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 PRRX2Q99811 253 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 C1QTNF3Q9BXJ4 246 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 SLC12A9Q9BXP2 914 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 FGF22Q9HCT0 170 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 NKIRAS1Q9NYS0 192 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 TMEM216Q9P0N5 145 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 PILRBQ9UKJ0 227 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 OARD1Q9Y530 152 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 PCYT1BQ9Y5K3 369 aaPredicted RBP6.71□□□□□ -1.34
USP16-203ENST00000399975 EYSQ5T1H1 3165 aa6.71□□□□□ -1.34
USP16-203ENST00000399975 ZFC3H1O60293 1989 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms