RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 CYTH2Q99418 400 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 ACSS3Q9H6R3 686 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 TMBIM4Q9HC24 238 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 SYBUQ9NX95 663 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 DKK4Q9UBT3 224 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 SLC24A2Q9UI40 661 aa17.17■□□□□ 0.34
SMIM11A-202ENST00000399295 FAM237BA0A1B0GVD1 139 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 EXOC1LA0A1B0GW35 172 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 OR51F1A6NGY5 319 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 PRR19A6NJB7 356 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 PDZK1P1A8MUH7 402 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 HMGB1P1B2RPK0 211 aaPredicted RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 CASC3O15234 703 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 PPM1DO15297 605 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 ZW10O43264 779 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 RPLP0P05388 317 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 ATP5DP30049 168 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 PRAMEP78395 509 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 SPIDRQ14159 915 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 AGBL2Q5U5Z8 902 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 AFTPHQ6ULP2 937 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 RBM44Q6ZP01 1051 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 ZNF438Q7Z4V0 828 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 SPRED1Q7Z699 444 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 TDRPQ86YL5 185 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 MPP5Q8N3R9 675 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 BEND7Q8N7W2 519 aaPredicted RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 OR6P1Q8NGX9 317 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 UHMK1Q8TAS1 419 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 NAT14Q8WUY8 206 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 GFM1Q96RP9 751 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 TMEM121BQ9BXQ6 578 aaPredicted RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 LRRN3Q9H3W5 708 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 MRM3Q9HC36 420 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
SMIM11A-202ENST00000399295 RP1P56715 2156 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 IGLV3-16A0A075B6K0 115 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 KIR2DS5A0A0G2JLQ3 304 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 A0A0G2JNG1 304 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 A0A1W2PQM1 296 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 TCRBV9S1A1TA0A576 114 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 C1QTNF9BB2RNN3 333 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 KIR2DS3K7RE56 304 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 NTN3O00634 580 aaPredicted RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 B4GAT1O43505 415 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 CDH16O75309 829 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 CSO75390 466 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 USP1O94782 785 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 GOT2P00505 430 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 C1QTNF9P0C862 333 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 ATP1B2P14415 290 aaPredicted RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 ALDH4A1P30038 563 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 FOXN2P32314 431 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 GPR3P46089 330 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 FASLGP48023 281 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 OR1D5P58170 312 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 DMPKQ09013 629 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 CAMK2BQ13554 666 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 KIR2DS5Q14953 304 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 NR1D2Q14995 579 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 DBN1Q16643 649 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 BCL7AQ4VC05 210 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 UBAP2Q5T6F2 1119 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 ABRAXAS1Q6UWZ7 409 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 WASH2PQ6VEQ5 465 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 UNC5AQ6ZN44 842 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 SLC9B2Q86UD5 537 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 OR4L1Q8NH43 312 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 FBF1Q8TES7 1133 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 CCDC97Q96F63 343 aaPredicted RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 KIFC1Q9BW19 673 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 STN1Q9H668 368 aaKnown RBP17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
SMIM11A-202ENST00000399295 ZNF106Q9H2Y7 1883 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 ACACAQ13085 2346 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 AKAP13Q12802 2813 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 KLHL33A6NCF5 533 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 TRABD2BA6NFA1 517 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 MGAT4DA6NG13 374 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 RGS16O15492 202 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 SGTAO43765 313 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 RPL10P27635 214 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 NMBRP28336 390 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 PBLDP30039 288 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 HHEXQ03014 270 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 NAB1Q13506 487 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 ISXQ2M1V0 245 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 AGAP9Q5VTM2 703 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 LYPLAL1Q5VWZ2 237 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 CAPN12Q6ZSI9 719 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 AVL9Q8NBF6 648 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 SGSM3Q96HU1 749 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 ATP6V1G3Q96LB4 118 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 LINC00615Q96LM1 132 aaPredicted RBP17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 TTC1Q99614 292 aa17.14■□□□□ 0.33
SMIM11A-202ENST00000399295 SLC38A3Q99624 504 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms