RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 TMEM164Q5U3C3 297 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 DENND5AQ6IQ26 1287 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 TMEM220Q6QAJ8 160 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 ABRAXAS1Q6UWZ7 409 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 AMZ2Q86W34 360 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 KLHDC8BQ8IXV7 354 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 RASGEF1AQ8N9B8 481 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 RCBTB1Q8NDN9 531 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 NCSTNQ92542 709 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 CCDC74BQ96LY2 380 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 PRORYQ9H606 182 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 ASB8Q9H765 288 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 KCTD3Q9Y597 815 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 GCN1Q92616 2671 aaKnown RBP11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 KALRNO60229 2985 aa11.57□□□□□ -0.56
SMIM11A-201ENST00000399292 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 GPR39O43194 453 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 NRDCO43847 1150 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 POP7O75817 140 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 SRP72O76094 671 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 PRAMEF1O95521 474 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 METTL18O95568 372 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 CCDC175P0C221 793 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 THRAP10827 490 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 RPL10P27635 214 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 CSTF2P33240 577 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 CA5AP35218 305 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 HADHAP40939 763 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ETV5P41161 510 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 UBE2IP63279 158 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 CXADRP78310 365 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ATMQ13315 3056 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 MSLNQ13421 630 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 COL9A2Q14055 689 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 SEPT7Q16181 437 aaKnown RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 LONRF2Q1L5Z9 754 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 AGAP9Q5VTM2 703 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 KCTD11Q693B1 232 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 WDR74Q6RFH5 385 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 WASH2PQ6VEQ5 465 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ZNF662Q6ZS27 426 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 GPR155Q7Z3F1 870 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 C11orf96Q7Z7L8 435 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 SLC13A5Q86YT5 568 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 TRIM48Q8IWZ4 208 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 AGBL5Q8NDL9 886 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 DDHD1Q8NEL9 900 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 USP7Q93009 1102 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 FCRL3Q96P31 734 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ALS2CR12Q96Q35 445 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 C19orf43Q9BQ61 176 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 EPB41L1Q9H4G0 881 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 LRRC40Q9H9A6 602 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 UCK1Q9HA47 277 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 LZTFL1Q9NQ48 299 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 WASH6PQ9NQA3 447 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 SMOXQ9NWM0 555 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ZNF624Q9P2J8 865 aaPredicted RBP11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ZNF148Q9UQR1 794 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 ADAMTS20P59510 1910 aa11.56□□□□□ -0.56
SMIM11A-201ENST00000399292 COL27A1Q8IZC6 1860 aaPredicted RBP11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 PRR19A6NJB7 356 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 OR2AG2A6NM03 316 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 LIASO43766 372 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 RGS9O75916 674 aaPredicted RBP11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 AP2A1O95782 977 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 FGF3P11487 239 aaPredicted RBP11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 CCL4P13236 92 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TPH1P17752 444 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 AKT1P31749 480 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 CSF2RBP32927 897 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 HALP42357 657 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 MAPK9P45984 424 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 IDH3AP50213 366 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 CTSCP53634 463 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 DRG2P55039 364 aaKnown RBP11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TMPRSS15P98073 1019 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 XIAPP98170 497 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 SNAP47Q5SQN1 464 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 FNBP1LQ5T0N5 605 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 LINC00523Q86TU6 105 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 OR13C4Q8NGS5 318 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 ATG4AQ8WYN0 398 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 CXorf40BQ96DE9 158 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 SGF29Q96ES7 293 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 DCUN1D1Q96GG9 259 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TAAR9Q96RI9 348 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TBC1D10AQ9BXI6 508 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 B3GNT4Q9C0J1 378 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 TMEM9Q9P0T7 183 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 ACSL6Q9UKU0 697 aa11.55□□□□□ -0.56
SMIM11A-201ENST00000399292 ARHGEF17Q96PE2 2063 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms