RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CHRM1P11229 460 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IL10P22301 178 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MSX2P35548 267 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NNMTP40261 264 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HNMTP50135 292 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DIO3P55073 304 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DCDC1P59894 354 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PTSQ03393 145 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SP140Q13342 867 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NFYCQ13952 458 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FUT11Q495W5 492 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LRRC66Q68CR7 880 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LETMD1Q6P1Q0 360 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LAYNQ6UX15 382 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NEK10Q6ZWH5 1172 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRIM46Q7Z4K8 759 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LILRA2Q8N149 483 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AADATQ8N5Z0 425 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PACRGLQ8N7B6 248 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GLB1L3Q8NCI6 653 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GPR26Q8NDV2 337 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR4F6Q8NGB9 312 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR52B6Q8NGF0 335 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DNAJB8Q8NHS0 232 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 POP5Q969H6 163 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 VOPP1Q96AW1 172 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC45A3Q96JT2 553 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PKP2Q99959 881 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TCF25Q9BQ70 676 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BOCQ9BWV1 1114 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NDUFA13Q9P0J0 144 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PTGDR2Q9Y5Y4 395 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NME4O00746 187 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 XYLBO75191 536 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RNASEH2AO75792 299 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FCGR1AP12314 374 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BMP2P12643 396 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EPB42P16452 691 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UGT1A6P19224 532 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UGT1A1P22309 533 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UGT1A4P22310 534 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 JAK1P23458 1154 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UGT1A3P35503 534 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UGT1A5P35504 534 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SPINT3P49223 89 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CHN2P52757 468 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRAF3Q13114 568 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PDK3Q15120 406 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TLR1Q15399 786 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PLEKHS1Q5SXH7 462 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IL23RQ5VWK5 629 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IL27RAQ6UWB1 636 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GDPD4Q6W3E5 623 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZFAND4Q86XD8 727 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZSWIM9Q86XI8 627 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AHI1Q8N157 1196 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RAD9AQ99638 391 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EGFL8Q99944 293 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BBS2Q9BXC9 721 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PCDHAC1Q9H158 963 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NSUN3Q9H649 340 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SPHK2Q9NRA0 654 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 WWOXQ9NZC7 414 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EIF3LQ9Y262 564 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CFAP99D6REC4 459 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TAPBPO15533 448 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NUAK1O60285 661 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ACRP10323 421 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ARSAP15289 507 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BMPR1AP36894 532 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZNF33BQ06732 778 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ARHGEF7Q14155 803 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GBX1Q14549 363 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FXNQ16595 210 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FBXO46Q6PJ61 603 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DPY19L3Q6ZPD9 716 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OTOP2Q7RTS6 562 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PROSER1Q86XN7 944 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TMEM25Q86YD3 366 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CLDN19Q8N6F1 224 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR2T11Q8NH01 316 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PROKR1Q8TCW9 393 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EME1Q96AY2 570 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RPL10LQ96L21 214 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ACOX2Q99424 681 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC12A9Q9BXP2 914 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PRSS21Q9Y6M0 314 aa17.41■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MTCL1Q9Y4B5 1905 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TSPAN11A1L157 253 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZNF197O14709 1029 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LSM1O15116 133 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CCL16O15467 120 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RNASEH1O60930 286 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ULK1O75385 1050 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 STK16O75716 305 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LINGO3P0C6S8 592 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GKP32189 559 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms