RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 APMAPQ9HDC9 416 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 SIDT1Q9NXL6 827 aaKnown RBP13.12□□□□□ -0.31
VCX3A-202ENST00000398729 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 PILRAQ9UKJ1 303 aa13.12□□□□□ -0.31
VCX3A-202ENST00000398729 H7C0S8 307 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 ATP1B2P14415 290 aaPredicted RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 TPH1P17752 444 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 MAP4P27816 1152 aaKnown RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 PRLHRP49683 370 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 SEPHS1P49903 392 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 CYP4F2P78329 520 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 SEPT6Q14141 434 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 POU6F1Q14863 301 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 ZRANB3Q5FWF4 1079 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 FAM92BQ6ZTR7 304 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 STYXQ8WUJ0 223 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 NAT14Q8WUY8 206 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 DNAJC1Q96KC8 554 aaKnown RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 ARHGAP9Q9BRR9 750 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 FAM96AQ9H5X1 160 aa13.11□□□□□ -0.31
VCX3A-202ENST00000398729 NLE1Q9NVX2 485 aaPredicted RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 CFAP20Q9Y6A4 193 aaKnown RBP13.11□□□□□ -0.31
VCX3A-202ENST00000398729 SPENQ96T58 3664 aaKnown RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 ERI2A8K979 691 aaKnown RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 CCL22O00626 93 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 SGTAO43765 313 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 LIASO43766 372 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 STK17BO94768 372 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 GAS8O95995 478 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 POLBP06746 335 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 LIFP15018 202 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 ACRV1P26436 265 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 FDFT1P37268 417 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 GSE1Q14687 1217 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 TAS2R42Q7RTR8 314 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 CFAP206Q8IYR0 622 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 HM13Q8TCT9 377 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 ZFPM2Q8WW38 1151 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 CDKN2AIPNLQ96HQ2 116 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 OR6C1Q96RD1 312 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 INSM2Q96T92 566 aaPredicted RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 CCM2Q9BSQ5 444 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 SPRY4Q9C004 299 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 TRIT1Q9H3H1 467 aaKnown RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 ZDHHC3Q9NYG2 299 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 ZNF148Q9UQR1 794 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 TMEM184BQ9Y519 407 aaPredicted RBP13.1□□□□□ -0.31
VCX3A-202ENST00000398729 COLEC10Q9Y6Z7 277 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
VCX3A-202ENST00000398729 SPTBN1Q01082 2364 aaKnown RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 IGLV3-16A0A075B6K0 115 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 TRBV5-4A0A0C4DH59 114 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 E7EVH7 732 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 KIF1CO43896 1103 aaKnown RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 IFNB1P01574 187 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CCDC175P0C221 793 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 NDUFS1P28331 727 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 LMAN1P49257 510 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CDKN1CP49918 316 aaPredicted RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 SH3BP2P78314 561 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CACNG1Q06432 222 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 ABHD18Q0P651 414 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CDH17Q12864 832 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 KRT33BQ14525 404 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 IL11RAQ14626 422 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 SKIDA1Q1XH10 827 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 DUS1LQ6P1R4 473 aaKnown RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 ZNF449Q6P9G9 518 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 TIPARPQ7Z3E1 657 aaKnown RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 SERPINA9Q86WD7 417 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 OOSP2Q86WS3 158 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 DNAAF3Q8N9W5 541 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
VCX3A-202ENST00000398729 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 KLHL6Q8WZ60 621 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 UBXN4Q92575 508 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 RMDN2Q96LZ7 410 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 CD180Q99467 661 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 EFHD1Q9BUP0 239 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 ULBP3Q9BZM4 244 aa13.09□□□□□ -0.31
VCX3A-202ENST00000398729 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms