RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TPRP12270 2363 aaKnown RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 IGHV5-10-1A0A0J9YXX1 117 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 H3BMM5 538 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 PLD2O14939 933 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 NDUFS3O75489 264 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ITGA2BP08514 1039 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 THRAP10827 490 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ARNTP27540 789 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 RBMS1P29558 406 aaKnown RBP13.96□□□□□ -0.17
HDDC2-202ENST00000398153 TERF1P54274 439 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 CBLBQ13191 982 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 TUBB2AQ13885 445 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 GPR18Q14330 331 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ST3GAL2Q16842 350 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 TYSND1Q2T9J0 566 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 XKR5Q6UX68 686 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-202ENST00000398153 B3GNT8Q7Z7M8 397 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 PDIK1LQ8N165 341 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 FBXO39Q8N4B4 442 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 MDM1Q8TC05 714 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 CALML6Q8TD86 181 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 FGF11Q92914 225 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-202ENST00000398153 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-202ENST00000398153 C12orf66Q96MD2 445 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 PANX3Q96QZ0 392 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 INSM2Q96T92 566 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-202ENST00000398153 NUDT22Q9BRQ3 303 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 FOXP3Q9BZS1 431 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 WWP1Q9H0M0 922 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 MVB12BQ9H7P6 319 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 GNPTGQ9UJJ9 305 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
HDDC2-202ENST00000398153 MN1Q10571 1320 aaPredicted RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 WDFY3Q8IZQ1 3526 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 TTI1O43156 1089 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 OR1I1O60431 355 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 BRINP1O60477 761 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 C9P02748 559 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 MPOP05164 745 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 AMD1P17707 334 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 PGAM1P18669 254 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 CFHR1Q03591 330 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 CKAP4Q07065 602 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 SEMA3AQ14563 771 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 TBC1D25Q3MII6 688 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 C3orf38Q5JPI3 329 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 PHF19Q5T6S3 580 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 NKAIN2Q5VXU1 208 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 NEPROQ6NW34 567 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 TMPRSS9Q7Z410 1059 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 AGBL5Q8NDL9 886 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 SNIP1Q8TAD8 396 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 NCSTNQ92542 709 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 ELMO1Q92556 727 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 STAMBPL1Q96FJ0 436 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 ZDHHC12Q96GR4 267 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 KRT12Q99456 494 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 TBC1D10AQ9BXI6 508 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 P2RY12Q9H244 342 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 SEMA6CQ9H3T2 930 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 KIR3DX1Q9H7L2 352 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 IMP3Q9NV31 184 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 INTS10Q9NVR2 710 aaKnown RBP13.95□□□□□ -0.18
HDDC2-202ENST00000398153 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 PCDHGA7Q9Y5G6 932 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 FAM169AQ9Y6X4 670 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 DMXL2Q8TDJ6 3036 aa13.95□□□□□ -0.18
HDDC2-202ENST00000398153 SLC5A10A0PJK1 596 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CDRT15L2A8MXV6 281 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 KDM1AO60341 852 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 ESR1P03372 595 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 JMJD7P0C870 316 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CSF2RBP32927 897 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CSTF2P33240 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CAPZBP47756 277 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 PPM1FP49593 454 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
HDDC2-202ENST00000398153 KRT33BQ14525 404 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 LONRF1Q17RB8 773 aa13.94□□□□□ -0.18
HDDC2-202ENST00000398153 CES3Q6UWW8 571 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms