RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FBXW8Q8N3Y1 598 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 GINS4Q9BRT9 223 aa11.21□□□□□ -0.62
TTC28-201ENST00000397906 PPEF2O14830 753 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 ALOX5P09917 674 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TYRP14679 529 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 IL23RQ5VWK5 629 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SSNA1O43805 119 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A9O60656 530 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 HCN1O60741 890 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 DBIP07108 87 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 CSF2RAP15509 400 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A6P19224 532 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A1P22309 533 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A4P22310 534 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 ITGA3P26006 1051 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A3P35503 534 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 MTHFRP42898 656 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SPPL2CQ8IUH8 684 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 PHF11Q9UIL8 331 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 MED31Q9Y3C7 131 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 ANKRD22Q5VYY1 191 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 LRRC10BA6NIK2 292 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TMCC2O75069 709 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SERPINA6P08185 405 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CLCNKAP51800 687 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 MADCAM1Q13477 382 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CYP2U1Q7Z449 544 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 PDP1Q9P0J1 537 aaPredicted RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 LOC102724159A0A0B4J2E5 919 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 KHNYNO15037 678 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 SASH3O75995 380 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SERPINA1P01009 418 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CTSKP43235 329 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 NCBP2P52298 156 aaKnown RBP eCLIP11.2□□□□□ -0.621e-8■□□□□ 9.4
TTC28-201ENST00000397906 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 PWP2Q15269 919 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 CA9Q16790 459 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 PRODHO43272 600 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.623e-6■■■□□ 18.2
TTC28-201ENST00000397906 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 OR13C4Q8NGS5 318 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 KCNQ1P51787 676 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 GHRHRQ02643 423 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SPIRE1Q08AE8 756 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SPATA19Q7Z5L4 167 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 C2CD4BA6NLJ0 364 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TMCO2Q7Z6W1 182 aaPredicted RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 ZBTB46Q86UZ6 589 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 GRHL3Q8TE85 626 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TNFRSF25Q93038 417 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TEFMQ96QE5 360 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 NDC1Q9BTX1 674 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 CTPS2Q9NRF8 586 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 FSCN2O14926 492 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TPSB2P20231 275 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 NRG3P56975 720 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TPSAB1Q15661 275 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 ASB3Q9Y575 518 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SNAP91O60641 907 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 FADS2O95864 444 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 ASMTP46597 345 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 PRR5P85299 388 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 BCAS3Q9H6U6 928 aa11.2□□□□□ -0.62
TTC28-201ENST00000397906 SAMD4AQ9UPU9 718 aaKnown RBP11.2□□□□□ -0.62
TTC28-201ENST00000397906 VNN1O95497 513 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 LYNP07948 512 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 COL6A1P12109 1028 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 IL7RP16871 459 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 HTR7P34969 479 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 BNIP2Q12982 314 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 CERS6Q6ZMG9 384 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 OR7A2PQ8NGA2 310 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 NRP2O60462 931 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 POU2F1P14859 743 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 KCTD8Q6ZWB6 473 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TDRD1Q9BXT4 1180 aaKnown RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 JMJD7P0C870 316 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 SLC11A1P49279 550 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TSTD2Q5T7W7 516 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 CPSF7Q8N684 471 aaKnown RBP11.19□□□□□ -0.62
TTC28-201ENST00000397906 WFIKKN2Q8TEU8 576 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
TTC28-201ENST00000397906 ALG2Q9H553 416 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms