RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CAPN1P07384 714 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 CAPN3P20807 821 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 XPAP23025 273 aaPredicted RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 WEE1P30291 646 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 HMOX2P30519 316 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 MRPS22P82650 360 aaKnown RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 GRIK2Q13002 908 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 ATP6AP1LQ52LC2 224 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 PDCD4Q53EL6 469 aaKnown RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 ARSIQ5FYB1 569 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 COQ5Q5HYK3 327 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 SCIMPQ6UWF3 145 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 LAYNQ6UX15 382 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 RNF111Q6ZNA4 994 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 METTL6Q8TCB7 284 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 TSPEARQ8WU66 669 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 OSCP1Q8WVF1 389 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 RHBDF1Q96CC6 855 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 DCUN1D1Q96GG9 259 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 LRIG1Q96JA1 1093 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 SAMD11Q96NU1 681 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 ECSITQ9BQ95 431 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 CD244Q9BZW8 370 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 BRINP2Q9C0B6 783 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 IPPKQ9H8X2 491 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 PCDH12Q9NPG4 1184 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 C6orf203Q9P0P8 240 aaPredicted RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 EPS15L1Q9UBC2 864 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 KIF26AQ9ULI4 1882 aaPredicted RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 CFAP99D6REC4 459 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 K7EPI3 171 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 TCN1P20061 433 aaPredicted RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 CCR7P32248 378 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 HTR6P50406 440 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 DIO3P55073 304 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 MS4A2Q01362 244 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 GPM6BQ13491 265 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 ZNF805Q5CZA5 627 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 PRPF38BQ5VTL8 546 aaKnown RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 IL27RAQ6UWB1 636 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 DPPA4Q7L190 304 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 RBM23Q86U06 439 aaKnown RBP14.69□□□□□ -0.06
CBX3-202ENST00000396386 RETREG3Q86VR2 466 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 PQLC1Q8N2U9 271 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 FAM83DQ9H4H8 585 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 BATF3Q9NR55 127 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 TMEM181Q9P2C4 612 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 DKK3Q9UBP4 350 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 TMPRSS11EQ9UL52 423 aa14.69□□□□□ -0.06
CBX3-202ENST00000396386 CASQ2O14958 399 aaPredicted RBP14.68□□□□□ -0.06
CBX3-202ENST00000396386 CTSLP07711 333 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 ENO2P09104 434 aaPredicted RBP14.68□□□□□ -0.06
CBX3-202ENST00000396386 CISD3P0C7P0 127 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 TIMP2P16035 220 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 AOAHP28039 575 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 MSX2P35548 267 aaPredicted RBP14.68□□□□□ -0.06
CBX3-202ENST00000396386 PIK3CGP48736 1102 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 KCNK10P57789 538 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 ST8SIA6P61647 398 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 RCAN2Q14206 197 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 GBX1Q14549 363 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 TRIP10Q15642 601 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 CDKL4Q5MAI5 379 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 BLOC1S3Q6QNY0 202 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 DET1Q7L5Y6 550 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 MILR1Q7Z6M3 343 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 ADGRD2Q7Z7M1 963 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 FNDC5Q8NAU1 212 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 FAM156AQ8NDB6 213 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 RSPRY1Q96DX4 576 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 SPDL1Q96EA4 605 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 LRRC3BQ96PB8 259 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 C1orf50Q9BV19 199 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 ZIM2Q9NZV7 527 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 SLC27A6Q9Y2P4 619 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 COL4A3Q01955 1670 aa14.68□□□□□ -0.06
CBX3-202ENST00000396386 NUAK1O60285 661 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SYNCRIPO60506 623 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 KATNA1O75449 491 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 C8GP07360 202 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 CA3P07451 260 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 ANXA5P08758 320 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 MPC1LP0DKB6 136 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 ATP1B2P14415 290 aaPredicted RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 PEX2P28328 305 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 SLC7A2P52569 658 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 FOXM1Q08050 763 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TRAP1Q12931 704 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 RALGDSQ12967 914 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TRIM25Q14258 630 aaKnown RBP14.67□□□□□ -0.06
CBX3-202ENST00000396386 NR6A1Q15406 480 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 VPS26BQ4G0F5 336 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 C6orf136Q5SQH8 315 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 PLEKHS1Q5SXH7 462 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 C12orf40Q86WS4 652 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 TRAM1L1Q8N609 369 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 HCAR2Q8TDS4 363 aa14.67□□□□□ -0.06
CBX3-202ENST00000396386 HOPXQ9BPY8 73 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms