RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SLC5A10A0PJK1 596 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 PRAMEF26H0Y7S4 382 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 H0Y8X5 98 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 K7ESF4 209 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 LIN7AO14910 233 aaPredicted RBP20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 GRID2O43424 1007 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 PI15O43692 258 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 FAM107AO95990 144 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 HOXC4P09017 264 aaPredicted RBP20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 MTHFD2P13995 350 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 GFAPP14136 432 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 DRD4P21917 467 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 DNAJB13P59910 316 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 ARHGAP8P85298 464 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 TJAP1Q5JTD0 557 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 CES4AQ5XG92 561 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 CFAP206Q8IYR0 622 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 LILRA3Q8N6C8 439 aaPredicted RBP20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 OR2L2Q8NH16 312 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 GLMNQ92990 594 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 GATA5Q9BWX5 397 aaPredicted RBP20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 RMI1Q9H9A7 625 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 COG4Q9H9E3 785 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 NCKIPSDQ9NZQ3 722 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 DLGAP2Q9P1A6 1054 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 MOSPD1Q9UJG1 213 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 ADAMTS6Q9UKP5 1117 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 DMTF1Q9Y222 760 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 INVSQ9Y283 1065 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 SLC17A4Q9Y2C5 497 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 HS3ST3A1Q9Y663 406 aa20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 DNMT3AQ9Y6K1 912 aaPredicted RBP20.03■□□□□ 0.8
VCPKMT-202ENST00000395860 MGAT4DA6NG13 374 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 AXIN1O15169 862 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 KMOO15229 486 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 DCXO43602 365 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 EDF1O60869 148 aaKnown RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 NUDT1P36639 197 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 PREPP48147 710 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 SLC1A6P48664 564 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 NAGLUP54802 743 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 KIAA1024LP59773 190 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 NFKB2Q00653 900 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 ZNF658BQ4V348 819 aaPredicted RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 GCNT7Q6ZNI0 430 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 RAB44Q7Z6P3 723 aaPredicted RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 C11orf96Q7Z7L8 435 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 FBXO39Q8N4B4 442 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 PTGR2Q8N8N7 351 aaPredicted RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 HM13Q8TCT9 377 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 SNX19Q92543 992 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 SPACA7Q96KW9 195 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 THAP1Q9NVV9 213 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 SPATA6Q9NWH7 488 aaPredicted RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 UTP6Q9NYH9 597 aaKnown RBP20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 CD274Q9NZQ7 290 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 GULP1Q9UBP9 304 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 TMCO1Q9UM00 188 aa20.02■□□□□ 0.8
VCPKMT-202ENST00000395860 NCF1BA6NI72 391 aaPredicted RBP20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 NCF1CA8MVU1 366 aaPredicted RBP20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 SNX2O60749 519 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 CEACAM5P06731 702 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 C8GP07360 202 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 NCF1P14598 390 aaPredicted RBP20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 PFN3P60673 137 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 NFATC4Q14934 902 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 TGFBIQ15582 683 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 PFKFB4Q16877 469 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 MAMSTRQ6ZN01 415 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 AMZ2Q86W34 360 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 CCNYL1Q8N7R7 359 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 TMEM145Q8NBT3 493 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 OR6Y1Q8NGX8 325 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 NUDT4Q9NZJ9 180 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 OARD1Q9Y530 152 aa20.01■□□□□ 0.79
VCPKMT-202ENST00000395860 TMEM114B3SHH9 223 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 NDUFAB1O14561 156 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 SNNO75324 88 aaPredicted RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 S100BP04271 92 aaPredicted RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 AOC1P19801 751 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 KELP23276 732 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 HTR1BP28222 390 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 ABCE1P61221 599 aaKnown RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 PLOD1Q02809 727 aaPredicted RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 CFAP157Q5JU67 520 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 SLC22A15Q8IZD6 547 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 TMEM237Q96Q45 408 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 ZNF395Q9H8N7 513 aaPredicted RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 ACSS2Q9NR19 701 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 ZFC3H1O60293 1989 aaKnown RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 A0A1W2PPC4 97 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 H3BM21 787 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 ITM2AO43736 263 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 LYPLA1O75608 230 aaPredicted RBP20■□□□□ 0.79
VCPKMT-202ENST00000395860 IMPDH1P20839 514 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 HK3P52790 923 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 THOP1P52888 689 aa20■□□□□ 0.79
VCPKMT-202ENST00000395860 YPEL5P62699 121 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms