RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ARCN1P48444 511 aaKnown RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 VAV2P52735 878 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 XRCC4Q13426 336 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 IQCB1Q15051 598 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 PRKD1Q15139 912 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 NFKBIBQ15653 356 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 TEX44Q53QW1 395 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 SIRPB2Q5JXA9 342 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 TMTC4Q5T4D3 741 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 ZFYVE27Q5T4F4 411 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 TMEM220Q6QAJ8 160 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 RHOT1Q8IXI2 618 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 ZBTB2Q8N680 514 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 BEND7Q8N7W2 519 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 GLIS1Q8NBF1 620 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 CPT1BQ92523 772 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 RMDN2Q96LZ7 410 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 C12orf66Q96MD2 445 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 INSM2Q96T92 566 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 SMAD5Q99717 465 aaKnown RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A7Q9HAW7 530 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A10Q9HAW8 530 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A8Q9HAW9 530 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 SLAMF7Q9NQ25 335 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 PCMTD2Q9NV79 361 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 SOHLH2Q9NX45 425 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 GPR83Q9NYM4 423 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 LCMT1Q9UIC8 334 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 POMT2Q9UKY4 750 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 DNMT3AQ9Y6K1 912 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 DOCK10Q96BY6 2186 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 ANKRD17O75179 2603 aaKnown RBP14.96□□□□□ -0.01
CHMP3-202ENST00000393773 GLYATL1P3A0A0U1RQE8 302 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 OR6C74A6NCV1 312 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 ENO4A6NNW6 628 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 ZNF185O15231 689 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 DDX3YO15523 660 aaKnown RBP14.96□□□□□ -0.01
CHMP3-202ENST00000393773 LCA5LO95447 670 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 SERPINC1P01008 464 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 GYPCP04921 128 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 KLK3P07288 261 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-202ENST00000393773 MSL3P1P0C860 447 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 ATP1A4Q13733 1029 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 ZDHHC20Q5W0Z9 365 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 MED25Q71SY5 747 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 SYTL1Q8IYJ3 562 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 TMEM102Q8N9M5 508 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-202ENST00000393773 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
CHMP3-202ENST00000393773 OR1L3Q8NH93 324 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 PRR7Q8TB68 274 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 NAT14Q8WUY8 206 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 ZFPM2Q8WW38 1151 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 C19orf60Q96EN9 201 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 TEKT5Q96M29 485 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 CAPN11Q9UMQ6 739 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 POLEQ07864 2286 aa14.96□□□□□ -0.01
CHMP3-202ENST00000393773 DIDO1Q9BTC0 2240 aaKnown RBP14.95□□□□□ -0.02
CHMP3-202ENST00000393773 KRT86O43790 486 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 H2AFZP0C0S5 128 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 NFKB1P19838 968 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 HLA-DPA1P20036 260 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 WNT3AP56704 352 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 DYNLT1P63172 113 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 WASHC5Q12768 1159 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 ITGA9Q13797 1035 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 NCF4Q15080 339 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 NR6A1Q15406 480 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 PPP2R5EQ16537 467 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 FNBP1LQ5T0N5 605 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 ZNF385CQ66K41 422 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-202ENST00000393773 CCDC70Q6NSX1 233 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 H2AFVQ71UI9 128 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 GLT6D1Q7Z4J2 308 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 TICAM1Q8IUC6 712 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 OR2L2Q8NH16 312 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 CTNNBL1Q8WYA6 563 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-202ENST00000393773 OXNAD1Q96HP4 312 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-202ENST00000393773 MRGPRX2Q96LB1 330 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 FANCEQ9HB96 536 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHMP3-202ENST00000393773 HACD3Q9P035 362 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 FAM153AQ9UHL3 310 aa14.95□□□□□ -0.02
CHMP3-202ENST00000393773 MDC1Q14676 2089 aaKnown RBP14.94□□□□□ -0.02
CHMP3-202ENST00000393773 MGAT4DA6NG13 374 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 SLC9B1P1A6NJY1 282 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 A6NL46 340 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 TMEM150CB9EJG8 249 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 BUD23O43709 281 aaKnown RBP14.94□□□□□ -0.02
CHMP3-202ENST00000393773 SGTAO43765 313 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 KRT1P04264 644 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 SLC35G4P0C7Q5 338 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 POLR2CP19387 275 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-202ENST00000393773 VARSP26640 1264 aaKnown RBP14.94□□□□□ -0.02
CHMP3-202ENST00000393773 AKT1P31749 480 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 RRADP55042 308 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 RAPSNQ13702 412 aa14.94□□□□□ -0.02
CHMP3-202ENST00000393773 MESDQ14696 234 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms