RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DENND1CQ8IV53 801 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 BRSK1Q8TDC3 778 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 HEPHQ9BQS7 1158 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 SNTNA6NMZ2 147 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 GABRDO14764 452 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 FOXM1Q08050 763 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 CCDC149Q6ZUS6 474 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 LHPPQ9H008 270 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 EHD1Q9H4M9 534 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 GDAP2Q9NXN4 497 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 TMED5Q9Y3A6 229 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 RNF11Q9Y3C5 154 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 A0A1B0GUL6 1792 aa12.96□□□□□ -0.33
TRAPPC9-201ENST00000389328 OPRL1P41146 370 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 CD97P48960 835 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 CLCN2P51788 898 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 CRYBB1P53674 252 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 IL18R1Q13478 541 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 TIGD6Q17RP2 521 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 IRAK2O43187 625 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF26P17031 533 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ITPKAP23677 461 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 RXRGP48443 463 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR2B6P58173 313 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 OLR1P78380 273 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 TMEM102Q8N9M5 508 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 MINDY2Q8NBR6 621 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.34
TRAPPC9-201ENST00000389328 MMP3P08254 477 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 SH3BP2P78314 561 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLET1Q6UQ28 207 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 SNX29P2Q8IUI4 249 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PHACTR4Q8IZ21 702 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 MYRFLQ96LU7 910 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 RANBP9Q96S59 729 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 SMOQ99835 787 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TNFRSF11BO00300 401 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 KERAO60938 352 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 STK16O75716 305 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CKMP06732 381 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PFKMP08237 780 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 IQCF3P0C7M6 154 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 KCNA5P22460 613 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CCT3P49368 545 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 RPS7P62081 194 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TUBB3Q13509 450 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 RETSATQ6NUM9 610 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PLEKHM3Q6ZWE6 761 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CDKN2AIPNLQ96HQ2 116 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRIM45Q9H8W5 580 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 MOV10Q9HCE1 1003 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TRPV5Q9NQA5 729 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 OLAHQ9NV23 265 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 PEX16Q9Y5Y5 336 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARVCFO00192 962 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 FPGTO14772 594 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 DNAJB1P25685 340 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 TYSND1Q2T9J0 566 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 LINGO4Q6UY18 593 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 IGFN1Q86VF2 1251 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 HDAC2Q92769 488 aaKnown RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 C12orf42Q96LP6 360 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 EBPLQ9BY08 206 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 CIPCQ9C0C6 399 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 SPRTNQ9H040 489 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZIM2Q9NZV7 527 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
TRAPPC9-201ENST00000389328 H0YAE9 185 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 INMTO95050 263 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 TBX18O95935 607 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 FUT4P22083 530 aa12.94□□□□□ -0.34
TRAPPC9-201ENST00000389328 SLC6A2P23975 617 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms