RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CANXP27824 592 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PCSK1P29120 753 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SHMT1P34896 483 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RPL3P39023 403 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TNFSF9P41273 254 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MAGEA3P43357 314 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TNFRSF4P43489 277 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GCLCP48506 637 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GPR15P49685 360 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 JAK3P52333 1124 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RPS11P62280 158 aaKnown RBP eCLIP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NAAAQ02083 359 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CYP4A11Q02928 519 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LMNB2Q03252 620 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ENPEPQ07075 957 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KLHL30Q0D2K2 578 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SEMA3BQ13214 749 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CAMK2GQ13555 558 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC12A1Q13621 1099 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NONOQ15233 471 aaKnown RBP eCLIP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DDR2Q16832 855 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MTHFSDQ2M296 383 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SHROOM1Q2M3G4 852 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SOWAHAQ2M3V2 549 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CCDC178Q5BJE1 867 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TMEM255AQ5JRV8 349 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C9orf66Q5T8R8 295 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HEPHL1Q6MZM0 1159 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 WDR73Q6P4I2 378 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CEMP1Q6PRD7 247 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LMBR1LQ6UX01 489 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KIF6Q6ZMV9 814 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OVCH2Q7RTZ1 564 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RHPN2Q8IUC4 686 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 WDR63Q8IWG1 891 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RDH10Q8IZV5 341 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GPR137CQ8N3F9 429 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 METTL4Q8N3J2 472 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DDX51Q8N8A6 666 aaKnown RBP eCLIP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TDRD5Q8NAT2 981 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NPEPL1Q8NDH3 523 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OR6X1Q8NH79 312 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 BLOC1S5Q8TDH9 187 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 APPBP2Q92624 585 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PROX1Q92786 737 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZKSCAN4Q969J2 545 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OR10C1Q96KK4 312 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PCMTD1Q96MG8 357 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GPR78Q96P69 363 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GFM1Q96RP9 751 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LGMNQ99538 433 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NRTNQ99748 197 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PHF20Q9BVI0 1012 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HRH4Q9H3N8 390 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ACAD9Q9H845 621 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZNF430Q9H8G1 570 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IARS2Q9NSE4 1012 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CUTCQ9NTM9 273 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GGT7Q9UJ14 662 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MSRAQ9UJ68 235 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 AJAP1Q9UKB5 411 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PPP1R3CQ9UQK1 317 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SCML2Q9UQR0 700 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ANGPTL3Q9Y5C1 460 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HEMK1Q9Y5R4 338 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ACTL7AQ9Y615 435 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SPACA6W5XKT8 324 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ADAMTS7Q9UKP4 1686 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NUP214P35658 2090 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RLFQ13129 1914 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CHD4Q14839 1912 aa-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 BRD4O60885 1362 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1340P-201ENST00000384438 EMSYQ7Z589 1322 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MPDZO75970 2070 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRR14LQ5THK1 2151 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LRRK1Q38SD2 2015 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IGKV3-7A0A075B6H7 116 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 G3V2L1 256 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 APBB1O00213 710 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRYO14603 147 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SIVA1O15304 175 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TBX1O43435 398 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SORBS3O60504 671 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRAMEF2O60811 474 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TUSC2O75896 110 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KAT7O95251 611 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 BMP10O95393 424 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OXTP01178 125 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HSPB1P04792 205 aaKnown RBP-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LCKP06239 509 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CSF1RP07333 972 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CYP2C9P11712 490 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MMP8P22894 467 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ABCD3P28288 659 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC16A2P36021 539 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SEC61BP60468 96 aaKnown RBP-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZNF45Q02386 682 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CLCQ05315 142 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PMPCAQ10713 525 aa-2.4□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PLA2G7Q13093 441 aa-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms