RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 G6PDP11413 515 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NFKBIAP25963 317 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 MAP4P27816 1152 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ERVPABLB-1P60509 514 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 NKG7Q16617 165 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 DLEU7Q6UYE1 221 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 SPATA19Q7Z5L4 167 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 RIMKLAQ8IXN7 391 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 SFRP1Q8N474 314 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 OR13F1Q8NGS4 319 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 BRINP2Q9C0B6 783 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 ING2Q9H160 280 aa16.03■□□□□ 0.16
NKX3-1-201ENST00000380871 K7EPI3 171 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 KATNA1O75449 491 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 MBL2P11226 248 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 GGT5P36269 586 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 ZNF829Q3KNS6 432 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 C16orf87Q6PH81 154 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 ENPP6Q6UWR7 440 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 DNAJC14Q6Y2X3 702 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 PDZD8Q8NEN9 1154 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 ISG20Q96AZ6 181 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 ERLEC1Q96DZ1 483 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 CCDC97Q96F63 343 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 SLC22A12Q96S37 553 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 LRRC3Q9BY71 257 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 H0Y626 953 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 FUCA1P04066 466 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 UROSP10746 265 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 HLA-DPA1P20036 260 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 MZF1P28698 734 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 GKP32189 559 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 PIGAP37287 484 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 EEFSECP57772 596 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 ERVK-8P63133 956 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 EMX2Q04743 252 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 GPRIN3Q6ZVF9 776 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 RBM12BQ8IXT5 1001 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 PDPRQ8NCN5 879 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 FBXO30Q8TB52 745 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 OSCP1Q8WVF1 389 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 BORCS5Q969J3 196 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 CD274Q9NZQ7 290 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 TRPM5Q9NZQ8 1165 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 AGO1Q9UL18 857 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 NEUROG3Q9Y4Z2 214 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.16
NKX3-1-201ENST00000380871 E2F3O00716 465 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 INPPL1O15357 1258 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 ALPLP05186 524 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 TPP2P29144 1249 aaPredicted RBP16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 ZNF140P52738 457 aaPredicted RBP16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 GALNT18Q6P9A2 607 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 ZNF773Q6PK81 442 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 BTLAQ7Z6A9 289 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 SLC22A17Q8WUG5 538 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 FIG4Q92562 907 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 LINGO1Q96FE5 620 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 BDH2Q9BUT1 245 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 FKBPLQ9UIM3 349 aa16.02■□□□□ 0.15
NKX3-1-201ENST00000380871 ZNF840PA6NDX5 716 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 K7ERQ8 282 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 CPNE6O95741 557 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 NDST3O95803 873 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 ENO2P09104 434 aaPredicted RBP16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 C7P10643 843 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 CCNA2P20248 432 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 OGNP20774 298 aaKnown RBP16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 HTR1EP28566 365 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 PIK3CGP48736 1102 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 DCDC5Q6ZRR9 648 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 ZFAND4Q86XD8 727 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 TRIB3Q96RU7 358 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 DGCR6LQ9BY27 220 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 TOR3AQ9H497 397 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 POPDC3Q9HBV1 291 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 SYTL2Q9HCH5 934 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 MAN1A2O60476 641 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 VPS4BO75351 444 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 STC2O76061 302 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 CHEK2O96017 543 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 GJA1P17302 382 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 MTHFRP42898 656 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 ATP6AP1LQ52LC2 224 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 HID1Q8IV36 788 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 CENPSQ8N2Z9 138 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 ITFG1Q8TB96 612 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 IKZF5Q9H5V7 419 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 POLR3HQ9Y535 204 aaPredicted RBP16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 RAI2Q9Y5P3 530 aa16.01■□□□□ 0.15
NKX3-1-201ENST00000380871 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 FAM234BA2RU67 622 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 DFNA5O60443 496 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms