RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 NAT14Q8WUY8 206 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 RHBDF1Q96CC6 855 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 TMEM79Q9BSE2 394 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 ZNF576Q9H609 170 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 NOL11Q9H8H0 719 aaKnown RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 SFXN1Q9H9B4 322 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 PCDH12Q9NPG4 1184 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 AIG1Q9NVV5 245 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 BCAP29Q9UHQ4 241 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 DENND4AQ7Z401 1863 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 TULP3O75386 442 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 AP2A2O94973 939 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 ATP6V1C1P21283 382 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 SESN3P58005 492 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 GAB4Q2WGN9 574 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 HENMT1Q5T8I9 393 aaKnown RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 HSD11B1LQ7Z5J1 315 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 NPAS3Q8IXF0 933 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 TRAM1L1Q8N609 369 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 EFCAB3Q8N7B9 438 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 BPIFB1Q8TDL5 484 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 DNAJC9Q8WXX5 260 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 NAF1Q96HR8 494 aaKnown RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 RSRC1Q96IZ7 334 aaKnown RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 ASB16Q96NS5 453 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 CD244Q9BZW8 370 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 TTYH1Q9H313 450 aaPredicted RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 FAM83DQ9H4H8 585 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 SLC52A3Q9NQ40 469 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 RIC8BQ9NVN3 520 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 OBP2AQ9NY56 170 aa18.91■□□□□ 0.62
GMDS-201ENST00000380805 SUCOQ9UBS9 1254 aaKnown RBP18.91■□□□□ 0.62
GMDS-201ENST00000380805 TRIM38O00635 465 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 MRASO14807 208 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 NFATC1O95644 943 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 MPC1LP0DKB6 136 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 ATP1B2P14415 290 aaPredicted RBP18.9■□□□□ 0.62
GMDS-201ENST00000380805 XRCC1P18887 633 aaPredicted RBP18.9■□□□□ 0.62
GMDS-201ENST00000380805 MMP12P39900 470 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 TAF11Q15544 211 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 KIF19Q2TAC6 998 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 MMEL1Q495T6 779 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 LRRC73Q5JTD7 316 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 DHDDSQ86SQ9 333 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 RBM23Q86U06 439 aaKnown RBP18.9■□□□□ 0.62
GMDS-201ENST00000380805 RASGRP3Q8IV61 690 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 DDHD1Q8NEL9 900 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 OR2T11Q8NH01 316 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 SLC26A7Q8TE54 656 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 VPS35Q96QK1 796 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 LMAN2LQ9H0V9 348 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 GIMAP2Q9UG22 337 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 REV3LO60673 3130 aa18.9■□□□□ 0.62
GMDS-201ENST00000380805 H3BNX3 289 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 ACOT8O14734 319 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 BCAS2O75934 225 aaPredicted RBP18.89■□□□□ 0.61
GMDS-201ENST00000380805 MSH3P20585 1137 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 GGT5P36269 586 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 ERVK-8P63133 956 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 C18orf21Q32NC0 220 aaPredicted RBP18.89■□□□□ 0.61
GMDS-201ENST00000380805 PDCD4Q53EL6 469 aaKnown RBP18.89■□□□□ 0.61
GMDS-201ENST00000380805 FAM78AQ5JUQ0 283 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 PLEKHS1Q5SXH7 462 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 TRIM68Q6AZZ1 485 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 RNF111Q6ZNA4 994 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 NEK10Q6ZWH5 1172 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 TECPR1Q7Z6L1 1165 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 CDYL2Q8N8U2 506 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 PCYOX1LQ8NBM8 494 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 PPFIBP2Q8ND30 876 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 OR4F6Q8NGB9 312 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 GDPD5Q8WTR4 605 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 SMARCD2Q92925 531 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 ZSCAN5AQ9BUG6 496 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 SPATA16Q9BXB7 569 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 TRPV4Q9HBA0 871 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 SPAG4Q9NPE6 437 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 SUN2Q9UH99 717 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 NDUFAF1Q9Y375 327 aa18.89■□□□□ 0.61
GMDS-201ENST00000380805 PRRC2BQ5JSZ5 2229 aaKnown RBP18.89■□□□□ 0.61
GMDS-201ENST00000380805 PSMD11O00231 422 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 KPNA5O15131 536 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 SGTAO43765 313 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 C8GP07360 202 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 VIPR2P41587 438 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 HSPA7P48741 367 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 SP140Q13342 867 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 EIF4HQ15056 248 aaKnown RBP18.88■□□□□ 0.61
GMDS-201ENST00000380805 MUM1Q2TAK8 710 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 BLOC1S3Q6QNY0 202 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 Q6ZSR9 355 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 C12orf76Q8N812 135 aaPredicted RBP18.88■□□□□ 0.61
GMDS-201ENST00000380805 PYDC1Q8WXC3 89 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 ASB9Q96DX5 294 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 ACOX2Q99424 681 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 GPATCH1Q9BRR8 931 aaKnown RBP18.88■□□□□ 0.61
GMDS-201ENST00000380805 NTMT1Q9BV86 223 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 SLC12A9Q9BXP2 914 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 IPPKQ9H8X2 491 aa18.88■□□□□ 0.61
GMDS-201ENST00000380805 TMEM181Q9P2C4 612 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms