RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PTCH2Q9Y6C5 1203 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 UPK1BO75841 260 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 CPNE6O95741 557 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 POLBP06746 335 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 PTPN3P26045 913 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 HTR3AP46098 478 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 BPIFB3P59826 476 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 SCAPQ12770 1279 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 SEMA3BQ13214 749 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 TYSND1Q2T9J0 566 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 FCRLBQ6BAA4 426 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 TSPYL5Q86VY4 417 aaPredicted RBP15.31■□□□□ 0.04
FXN-201ENST00000377270 SYTL1Q8IYJ3 562 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 COLGALT2Q8IYK4 626 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 NPWQ8N729 165 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 SMARCD1Q96GM5 515 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 NAT9Q9BTE0 207 aa15.31■□□□□ 0.04
FXN-201ENST00000377270 AGO3Q9H9G7 860 aaKnown RBP15.31■□□□□ 0.04
FXN-201ENST00000377270 ZBBXA8MT70 800 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 NEMP1O14524 444 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PLD2O14939 933 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 IGHA2P01877 340 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CYP2A7P20853 494 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PCSK1P29120 753 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 DDOSTP39656 456 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 YAP1P46937 504 aaKnown RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 OR2B6P58173 313 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 UPP1Q16831 310 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 DPY19L3Q6ZPD9 716 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PPWD1Q96BP3 646 aaKnown RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 DUS3LQ96G46 650 aaKnown RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 TINAGL1Q9GZM7 467 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 TKTL2Q9H0I9 626 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PCDHAC1Q9H158 963 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 REV1Q9UBZ9 1251 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 TSC2P49815 1807 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 H3BMM5 538 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 ZBTB24O43167 697 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 F9P00740 461 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 POMCP01189 267 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PROS1P07225 676 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 EIF2DP41214 584 aaKnown RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 STEAP3Q658P3 488 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 ALG1LQ6GMV1 187 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 SYCE2Q6PIF2 218 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 NOXA1Q86UR1 476 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 HORMAD1Q86X24 394 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CNTD1Q8N815 330 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 MYLPFQ96A32 169 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PHF21AQ96BD5 680 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PGAP3Q96FM1 320 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 OR51B5Q9H339 312 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 ZNF385DQ9H6B1 395 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 IFT46Q9NQC8 304 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 FBXO8Q9NRD0 319 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 OR12D3Q9UGF7 316 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 NUDT5Q9UKK9 219 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CNOT6Q9ULM6 557 aaKnown RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 KLF2Q9Y5W3 355 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 A0A1W2PRG6 482 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 GPR182O15218 404 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PPM1BO75688 479 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 B3GAT3O94766 335 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 GNRH1P01148 92 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 BMP2P12643 396 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PPP5CP53041 499 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PLD1Q13393 1074 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 ANKRD39Q53RE8 183 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CATSPEREQ5SY80 951 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CRTC3Q6UUV7 619 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 NAPRTQ6XQN6 538 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 SLC16A12Q6ZSM3 486 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 BHLHA9Q7RTU4 235 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PRSS42Q7Z5A4 293 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 CAMK1DQ8IU85 385 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 PACRGLQ8N7B6 248 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 DNAAF3Q8N9W5 541 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 FNDC5Q8NAU1 212 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 GLB1L3Q8NCI6 653 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 RNF34Q969K3 372 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 FCRL3Q96P31 734 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 NPAS2Q99743 824 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 RTP3Q9BQQ7 232 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 ADI1Q9BV57 179 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 LHPPQ9H008 270 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 SAV1Q9H4B6 383 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 ZBTB26Q9HCK0 441 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 SPATA6Q9NWH7 488 aaPredicted RBP15.3■□□□□ 0.04
FXN-201ENST00000377270 BAG5Q9UL15 447 aa15.3■□□□□ 0.04
FXN-201ENST00000377270 TCRBV3S1A0A5B6 114 aa15.29■□□□□ 0.04
FXN-201ENST00000377270 TBX1O43435 398 aa15.29■□□□□ 0.04
FXN-201ENST00000377270 PTTG1O95997 202 aa15.29■□□□□ 0.04
FXN-201ENST00000377270 CTGFP29279 349 aa15.29■□□□□ 0.04
FXN-201ENST00000377270 PSMD8P48556 350 aa15.29■□□□□ 0.04
FXN-201ENST00000377270 PRIM2P49643 509 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms