RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ARHGAP15Q53QZ3 475 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 HABP4Q5JVS0 413 aaKnown RBP19.88■□□□□ 0.77
VSX1-202ENST00000376709 EME1Q96AY2 570 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 ZNF641Q96N77 438 aaPredicted RBP19.88■□□□□ 0.77
VSX1-202ENST00000376709 MCCC1Q96RQ3 725 aaPredicted RBP19.88■□□□□ 0.77
VSX1-202ENST00000376709 CEP44Q9C0F1 390 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 TDP1Q9NUW8 608 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 ZDHHC3Q9NYG2 299 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 OPTCQ9UBM4 332 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 PPIL1Q9Y3C6 166 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 MTCL1Q9Y4B5 1905 aaKnown RBP19.88■□□□□ 0.77
VSX1-202ENST00000376709 SLC7A1P30825 629 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 TRAF3Q13114 568 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 PDK3Q15120 406 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 FOXB2Q5VYV0 432 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 SULT1C3Q6IMI6 304 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 TICAM1Q8IUC6 712 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 OR2T34Q8NGX1 318 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 OR2T3Q8NH03 318 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 TRIM54Q9BYV2 358 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 SEMA6AQ9H2E6 1030 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 ZIM2Q9NZV7 527 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 SNX13Q9Y5W8 968 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 ST14Q9Y5Y6 855 aa19.88■□□□□ 0.77
VSX1-202ENST00000376709 FGF19O95750 216 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 TYRP14679 529 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 DDX6P26196 483 aaKnown RBP eCLIP19.87■□□□□ 0.77
VSX1-202ENST00000376709 GDF5P43026 501 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 TIGD2Q4W5G0 525 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 SFRP1Q8N474 314 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 GALNT4Q8N4A0 578 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 DNAJB14Q8TBM8 379 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 SPPL3Q8TCT6 385 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 LRTOMTQ8WZ04 291 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 IRF7Q92985 503 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 CD244Q9BZW8 370 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 BRD9Q9H8M2 597 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 CMTM6Q9NX76 183 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 KCTD5Q9NXV2 234 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 LZTS1Q9Y250 596 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 PLXNB3Q9ULL4 1909 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 MOSPD3O75425 235 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 EEDO75530 441 aaKnown RBP19.87■□□□□ 0.77
VSX1-202ENST00000376709 HSD17B1P14061 328 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 PTPN2P17706 415 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 EN2P19622 333 aaPredicted RBP19.87■□□□□ 0.77
VSX1-202ENST00000376709 ZFP36L2P47974 494 aaKnown RBP19.87■□□□□ 0.77
VSX1-202ENST00000376709 ABRAXAS2Q15018 415 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 CRY1Q16526 586 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 RFLNAQ6ZTI6 216 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 CHST14Q8NCH0 376 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 SLCO4A1Q96BD0 722 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 PPWD1Q96BP3 646 aaKnown RBP19.87■□□□□ 0.77
VSX1-202ENST00000376709 RHBDF1Q96CC6 855 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 TRIM15Q9C019 465 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 B4GALT6Q9UBX8 382 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 EGFL7Q9UHF1 273 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 LEF1Q9UJU2 399 aaPredicted RBP19.87■□□□□ 0.77
VSX1-202ENST00000376709 RAB26Q9ULW5 256 aa19.87■□□□□ 0.77
VSX1-202ENST00000376709 FAM234BA2RU67 622 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 ASPDHA6ND91 283 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 ZNF839A8K0R7 811 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 ATP6V1B2P21281 511 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 IRS1P35568 1242 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 PEX19P40855 299 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 RECQLP46063 649 aaPredicted RBP19.86■□□□□ 0.77
VSX1-202ENST00000376709 POLR2LP62875 67 aaKnown RBP19.86■□□□□ 0.77
VSX1-202ENST00000376709 BNIP2Q12982 314 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 PRKG2Q13237 762 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 ARHGEF7Q14155 803 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 TLR1Q15399 786 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 ELMSAN1Q6PJG2 1045 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 PROKR1Q8TCW9 393 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 TMEM79Q9BSE2 394 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 TRIM8Q9BZR9 551 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 SPHK2Q9NRA0 654 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 MYO7AQ13402 2215 aa19.86■□□□□ 0.77
VSX1-202ENST00000376709 PRRC2BQ5JSZ5 2229 aaKnown RBP19.86■□□□□ 0.77
VSX1-202ENST00000376709 LSM1O15116 133 aaKnown RBP19.85■□□□□ 0.77
VSX1-202ENST00000376709 RHOP08100 348 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 CBSLP0DN79 551 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 CBSP35520 551 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 EPHA5P54756 1037 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 SLC5A9Q2M3M2 681 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 AP5B1Q2VPB7 878 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 PAGE3Q5JUK9 113 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 ZDHHC20Q5W0Z9 365 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 PSRC1Q6PGN9 363 aaPredicted RBP19.85■□□□□ 0.77
VSX1-202ENST00000376709 CHCHD4Q8N4Q1 142 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 DUS3LQ96G46 650 aaKnown RBP19.85■□□□□ 0.77
VSX1-202ENST00000376709 LINC00597Q9H2U6 94 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 HEBP1Q9NRV9 189 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 CD84Q9UIB8 345 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 PCDHA9Q9Y5H5 950 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 DENRO43583 198 aaKnown RBP19.85■□□□□ 0.77
VSX1-202ENST00000376709 CAPNS1P04632 268 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 C1SP09871 688 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 OR56A5P0C7T3 313 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 EPCAMP16422 314 aa19.85■□□□□ 0.77
VSX1-202ENST00000376709 HSPA13P48723 471 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms