RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 FAM92AA1XBS5 289 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 ZNF99A8MXY4 864 aaPredicted RBP11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 CDC7O00311 574 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 GABRDO14764 452 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 MMP2P08253 660 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 RAP2AP10114 183 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 CD6P30203 668 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 DGCR6Q14129 220 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 SPESP1Q6UW49 350 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 FRA10AC1Q70Z53 315 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 ZCCHC7Q8N3Z6 543 aaKnown RBP11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 TOP6BLQ8N6T0 577 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 RPL3LQ92901 407 aaKnown RBP11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 GALPQ9UBC7 116 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 FAM50BQ9Y247 325 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 NOX1Q9Y5S8 564 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 ARL5AQ9Y689 179 aa11.35□□□□□ -0.59
TM9SF2-201ENST00000376387 NFKBIEO00221 500 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 MITFO75030 526 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ENO2P09104 434 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 MAGP20916 626 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CCR1P32246 355 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CTAG1AP78358 180 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PPP2R2BQ00005 443 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SLC10A7Q0GE19 358 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 LCP2Q13094 533 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SDE2Q6IQ49 451 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 RAB44Q7Z6P3 723 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 LRRC49Q8IUZ0 686 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 HID1Q8IV36 788 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CLIP4Q8N3C7 705 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 AURKBQ96GD4 344 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 IKZF5Q9H5V7 419 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ITGB1BP2Q9UKP3 347 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 M0R3G1 203 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 HS6ST1O60243 411 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PEX11BO96011 259 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 F9P00740 461 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CST1P01037 141 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 UBL4AP11441 157 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PFKLP17858 780 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 FMO3P31513 532 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PNPLA4P41247 253 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 IFITM2Q01629 132 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 TSNQ15631 228 aaKnown RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SIRPB2Q5JXA9 342 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 UBXN11Q5T124 520 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ZNF555Q8NEP9 628 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 OR6Q1Q8NGQ2 317 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 FCRL2Q96LA5 508 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 MFSD1Q9H3U5 465 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 NOL6Q9H6R4 1146 aaKnown RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 EDARQ9UNE0 448 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 LOC100130705A0A1B0GUX0 176 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PTGESO14684 152 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 LDB2O43679 373 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ECI2O75521 394 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ANXA6P08133 673 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SPNP16150 400 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ITGB6P18564 788 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ITIH1P19827 911 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 MZF1P28698 734 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CHRNB3Q05901 458 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 WDR45BQ5MNZ6 344 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 C6orf132Q5T0Z8 1188 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PAQR3Q6TCH7 311 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 GALNT5Q7Z7M9 940 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 FBXO39Q8N4B4 442 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 FNDC5Q8NAU1 212 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 OR13C4Q8NGS5 318 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ZNF583Q96ND8 569 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 QPCTLQ9NXS2 382 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 ERVK-11Q9UQG0 969 aa11.34□□□□□ -0.59
TM9SF2-201ENST00000376387 H3BUI4 141 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 DFNA5O60443 496 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 GABARAPO95166 117 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CHRNA1P02708 482 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 GGT1P19440 569 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 EVI2BP34910 448 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 PTPN5P54829 565 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 XKR7Q5GH72 579 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 TTC23Q5W5X9 447 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 BEND5Q7L4P6 421 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 SPATA19Q7Z5L4 167 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 TTC16Q8NEE8 873 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 SENP8Q96LD8 212 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 NSMCE3Q96MG7 304 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms