RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CPQQ9Y646 472 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TMEM247A6NEH6 219 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 WASH4PA8MWX3 477 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 OXCT1P55809 520 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ERVPABLB-1P60509 514 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 RAD51Q06609 339 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 GRIK2Q13002 908 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 C18orf21Q32NC0 220 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ATP6AP1LQ52LC2 224 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 BEND5Q7L4P6 421 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 SCML4Q8N228 414 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TEX26Q8N6G2 289 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ITCHQ96J02 903 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ZNF583Q96ND8 569 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ALPK1Q96QP1 1244 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 CGREF1Q99674 301 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TRIM62Q9BVG3 475 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 POPDC3Q9HBV1 291 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 SYTL2Q9HCH5 934 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 PCDH12Q9NPG4 1184 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 PAK1IP1Q9NWT1 392 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TAS2R13Q9NYV9 303 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ZIM2Q9NZV7 527 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 SEPT3Q9UH03 358 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 A0A0U1RQF3 1178 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 DFNA5O60443 496 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 NBNO60934 754 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 HMBSP08397 361 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 RHOQP17081 205 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 JAK1P23458 1154 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 GPR15P49685 360 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 LBX1P52954 281 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 KCNAB2Q13303 367 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 RAP1GAP2Q684P5 730 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 OVOS1Q6IE37 1185 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 CD300LGQ6UXG3 332 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 GPRIN3Q6ZVF9 776 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 PARP8Q8N3A8 854 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 SIDT2Q8NBJ9 832 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 BRSK1Q8TDC3 778 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 FRS2Q8WU20 508 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 HDAC2Q92769 488 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 ZNF347Q96SE7 839 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 B3GNT3Q9Y2A9 372 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 SPO11Q9Y5K1 396 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 TET1Q8NFU7 2136 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 OR1I1O60431 355 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 TULP3O75386 442 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 SOAT2O75908 522 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 CST1P01037 141 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 GGT1P19440 569 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 LSM3P62310 102 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 IFITM3Q01628 133 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 PTPRNQ16849 979 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 MYEOVQ96EZ4 313 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 SCLYQ96I15 445 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 HEPHQ9BQS7 1158 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 TBCDQ9BTW9 1192 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 NUSAP1Q9BXS6 441 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 VAPAQ9P0L0 249 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 AASSQ9UDR5 926 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 LIMD1Q9UGP4 676 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 FRMPD3Q5JV73 1810 aa13.91□□□□□ -0.18
CLCNKA-202ENST00000375692 COL4A4P53420 1690 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 C16orf96A6NNT2 1141 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 CLDN25C9JDP6 229 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 NIPSNAP2O75323 286 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 HPCAL1P37235 193 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TBX4P57082 545 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 EFEMP1Q12805 493 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 CTF1Q16619 201 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 DDR2Q16832 855 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TTC23Q5W5X9 447 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 LETMD1Q6P1Q0 360 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SPESP1Q6UW49 350 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TMEM179BQ7Z7N9 219 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OR10A6Q8NH74 314 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 GPR152Q8TDT2 470 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 ZFP90Q8TF47 636 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 AURKBQ96GD4 344 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SERPINB11Q96P15 392 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 IKZF5Q9H5V7 419 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SACM1LQ9NTJ5 587 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TMEM248Q9NWD8 314 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms