RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CAPN10Q9HC96 672 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 AMBNQ9NP70 447 aa16.58■□□□□ 0.25
VARS-215ENST00000375663 BEST1O76090 585 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 TFPTP0C1Z6 253 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 S100A1P23297 94 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 STT3AP46977 705 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 FBXL22Q6P050 247 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 SERPINA9Q86WD7 417 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 SLC34A3Q8N130 599 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 WDR36Q8NI36 951 aaKnown RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 ZNF420Q8TAQ5 688 aaPredicted RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 BRD9Q9H8M2 597 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 DNAJC11Q9NVH1 559 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 EVLQ9UI08 416 aaPredicted RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 EMCNQ9ULC0 261 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 HS3ST4Q9Y661 456 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 PRR23AA6NEV1 266 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 TNFRSF11BO00300 401 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 MYCLP1P12525 358 aaPredicted RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 CORO1AP31146 461 aaKnown RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 ALDH3A2P51648 485 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 ZNF773Q6PK81 442 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 DOK6Q6PKX4 331 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 SLC15A3Q8IY34 581 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 KDM1BQ8NB78 822 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 MAGEB10Q96LZ2 347 aaPredicted RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 BBS4Q96RK4 519 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 TLR6Q9Y2C9 796 aa16.58■□□□□ 0.24
VARS-215ENST00000375663 GPC6Q9Y625 555 aaPredicted RBP16.58■□□□□ 0.24
VARS-215ENST00000375663 NFKBIEO00221 500 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 FOXD2O60548 495 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 STBD1O95210 358 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SNAP29O95721 258 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 EIF2S1P05198 315 aaKnown RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 FAM163BP0C2L3 166 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 PRPS2P11908 318 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 ATN1P54259 1190 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 PRKAG1P54619 331 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SKIV2LQ15477 1246 aaKnown RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 CYP2A13Q16696 494 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 OMA1Q96E52 524 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 ATP6V1HQ9UI12 483 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SSR3Q9UNL2 185 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SLC22A1O15245 554 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 FFAR2O15552 330 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 CLPXO76031 633 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 GLDCP23378 1020 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 VARSP26640 1264 aaKnown RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 OR1D2P34982 312 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 ARSFP54793 590 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 PTPRCAPQ14761 206 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SETMARQ53H47 684 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 SULT1C3Q6IMI6 304 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 NUDT18Q6ZVK8 323 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 ARNTL2Q8WYA1 636 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 MUS81Q96NY9 551 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 COQ7Q99807 217 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 COPS4Q9BT78 406 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 KRCC1Q9NPI7 259 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 ZFP37Q9Y6Q3 630 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 GRID2O43424 1007 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 ATP4BP51164 291 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 NPTX1Q15818 432 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SYT16Q17RD7 645 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 SMG8Q8ND04 991 aaKnown RBP16.57■□□□□ 0.24
VARS-215ENST00000375663 STON2Q8WXE9 905 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 KIAA1191Q96A73 305 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 NMUR1Q9HB89 426 aa16.57■□□□□ 0.24
VARS-215ENST00000375663 EFNA1P20827 205 aaPredicted RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 MZT2BQ6NZ67 158 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 UGT2A3Q6UWM9 527 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 CSGALNACT1Q8TDX6 532 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CYP2S1Q96SQ9 504 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 SPRTNQ9H040 489 aaPredicted RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 POLR3BQ9NW08 1133 aaPredicted RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 A0A1B0GVM2 712 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 TCAF2A6NFQ2 919 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 H0YJX3 145 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 PLK4O00444 970 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 TP73O15350 636 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CD36P16671 472 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 RPL3P39023 403 aaKnown RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 RAB39AQ14964 217 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 GPR153Q6NV75 609 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 C11orf65Q8NCR3 313 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 OR4A15Q8NGL6 344 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 PIH1D2Q8WWB5 315 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 RPF2Q9H7B2 306 aaKnown RBP16.56■□□□□ 0.24
VARS-215ENST00000375663 EXD2Q9NVH0 621 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 EFCAB9A8MZ26 197 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CDK14O94921 469 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CYP11A1P05108 521 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CKBP12277 381 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 CDH4P55283 916 aa16.56■□□□□ 0.24
VARS-215ENST00000375663 GRB7Q14451 532 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms