RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 BLOC1S5Q8TDH9 187 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 UCK1Q9HA47 277 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 ZFYVE1Q9HBF4 777 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 CASS4Q9NQ75 786 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 PRDM8Q9NQV8 689 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 PIH1D1Q9NWS0 290 aaKnown RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 SIDT1Q9NXL6 827 aaKnown RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 POLHQ9Y253 713 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TRBV23OR9-2A0A075B6M9 112 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 A6NCN8 305 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 LILRA5A6NI73 299 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 INPP4BO15327 924 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 TOX3O15405 576 aaPredicted RBP11.94□□□□□ -0.5
LSM2-208ENST00000375661 DNAJC6O75061 913 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 TMEM63AO94886 807 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 ASMTLO95671 621 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 C9P02748 559 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 F3P13726 295 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 CDH17Q12864 832 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 NFATC2Q13469 925 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 IL11RAQ14626 422 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
LSM2-208ENST00000375661 LINC00523Q86TU6 105 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 NAT8LQ8N9F0 302 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 CCHCR1Q8TD31 782 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 LRRC45Q96CN5 670 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
LSM2-208ENST00000375661 GPR63Q9BZJ6 419 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 TRABDQ9H4I3 376 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 HACD3Q9P035 362 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 ASIC3Q9UHC3 531 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 ZNHIT2Q9UHR6 403 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 CD84Q9UIB8 345 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 KCND3Q9UK17 655 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 ICE1Q9Y2F5 2266 aa11.94□□□□□ -0.5
LSM2-208ENST00000375661 FAM187AA6NFU0 413 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 DNALI1O14645 258 aaPredicted RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 BUD23O43709 281 aaKnown RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 VPS4BO75351 444 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 RFPL1O75677 317 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 EML2O95834 649 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 HMGCLP35914 325 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 DLSTP36957 453 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 SPINT3P49223 89 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CLCNKAP51800 687 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 PMS2P54278 862 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CDK16Q00536 496 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 PTPRCAPQ14761 206 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 RNASEH2BQ5TBB1 312 aaKnown RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 ATP1A1-AS1Q5TC04 95 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 FHL5Q5TD97 284 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 LRRC8BQ6P9F7 803 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CYB5D1Q6P9G0 228 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 C6orf15Q6UXA7 325 aaPredicted RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 PPP1R21Q6ZMI0 780 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 ASB18Q6ZVZ8 466 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CHST15Q7LFX5 561 aaPredicted RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 GLT6D1Q7Z4J2 308 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 TRIM74Q86UV6 250 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 APLFQ8IW19 511 aaPredicted RBP11.93□□□□□ -0.5
LSM2-208ENST00000375661 MMGT1Q8N4V1 131 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 GALNT11Q8NCW6 608 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 MCUQ8NE86 351 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 BRSK1Q8TDC3 778 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 ULBP3Q9BZM4 244 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 PKD2L2Q9NZM6 624 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 IL17CQ9P0M4 197 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CPNE7Q9UBL6 633 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 TBC1D29Q9UFV1 150 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 VPS4AQ9UN37 437 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 PCDHGA6Q9Y5G7 932 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 ARL5AQ9Y689 179 aa11.93□□□□□ -0.5
LSM2-208ENST00000375661 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 RGSL1A5PLK6 1076 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 TP73O15350 636 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 LDB2O43679 373 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 SLC4A1P02730 911 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 MT-ND3P03897 115 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 BPIP17213 487 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 F8A1P23610 371 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 MAPK9P45984 424 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 MLLT10P55197 1068 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 FOXM1Q08050 763 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 ERV3-1Q14264 604 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 POU6F1Q14863 301 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 TAF1AQ15573 450 aaPredicted RBP11.92□□□□□ -0.5
LSM2-208ENST00000375661 IZUMO3Q5VZ72 239 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 CAPRIN2Q6IMN6 1127 aaKnown RBP11.92□□□□□ -0.5
LSM2-208ENST00000375661 MAATS1Q7Z4T9 603 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 CAND1Q86VP6 1230 aaKnown RBP11.92□□□□□ -0.5
LSM2-208ENST00000375661 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 PPIL6Q8IXY8 311 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
LSM2-208ENST00000375661 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms