RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TMEM35BQ8NCS4 154 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 CENPIQ92674 756 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-204ENST00000373560 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 PSKH2Q96QS6 385 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 CD180Q99467 661 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 NRTNQ99748 197 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 KLHL25Q9H0H3 589 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 ABI3Q9P2A4 366 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 PPIL1Q9Y3C6 166 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-204ENST00000373560 NKX2-6A6NCS4 301 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 DFFAO00273 331 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 PROM1O43490 865 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 HCRTR1O43613 425 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 MTA2O94776 668 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 CLDN7O95471 211 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 PEX11BO96011 259 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 IGHEP01854 428 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 SDC4P31431 198 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 SYKP43405 635 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 PNOCQ13519 176 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 LBRQ14739 615 aaKnown RBP11.86□□□□□ -0.51
HDAC8-204ENST00000373560 KRBA2Q6ZNG9 492 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 STRADAQ7RTN6 431 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 SLFN11Q7Z7L1 901 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 CCDC116Q8IYX3 515 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 AMER2Q8N7J2 671 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 THOC3Q96J01 351 aaKnown RBP11.86□□□□□ -0.51
HDAC8-204ENST00000373560 NUDCD1Q96RS6 583 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF559Q9BR84 538 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 CATSPERBQ9H7T0 1116 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 TMEM51Q9NW97 253 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 FZD10Q9ULW2 581 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF835Q9Y2P0 537 aa11.86□□□□□ -0.51
HDAC8-204ENST00000373560 LUC7L2Q9Y383 392 aaKnown RBP11.86□□□□□ -0.51
HDAC8-204ENST00000373560 ANK2Q01484 3957 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 OR6C74A6NCV1 312 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ARHGAP42A6NI28 874 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ADAM10O14672 748 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 CHUKO15111 745 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 FZD6O60353 706 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF202O95125 648 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ST6GAL1P15907 406 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 PTPN9P43378 593 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 SMCPP49901 116 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 TNFSF10P50591 281 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 STX17P56962 302 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 NOMO3P69849 1222 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 LRRC63Q05C16 580 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 TFF3Q07654 80 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 TMTC4Q5T4D3 741 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 NAA35Q5VZE5 725 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ISLR2Q6UXK2 745 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 ARCQ7LC44 396 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 C11orf96Q7Z7L8 435 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 FAM20CQ8IXL6 584 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 RBM12BQ8IXT5 1001 aaKnown RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 LHPPQ9H008 270 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 TSPAN10Q9H1Z9 355 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 SIX2Q9NPC8 291 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 C1GALT1Q9NS00 363 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 SLC22A11Q9NSA0 550 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 HRASLS2Q9NWW9 162 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 DHCR7Q9UBM7 475 aaKnown RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 PSMD13Q9UNM6 376 aa11.85□□□□□ -0.51
HDAC8-204ENST00000373560 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
HDAC8-204ENST00000373560 A0A0J9YYE9 177 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 H3BMH7 237 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 TRBC1P01850 177 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 PYGLP06737 847 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 PVRP15151 417 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 AGXTP21549 392 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 CMA1P23946 247 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 TPI1P60174 286 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 ARG2P78540 354 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 IL10RBQ08334 325 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 GALNT3Q14435 633 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 INAQ16352 499 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 RPE65Q16518 533 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 CAMK4Q16566 473 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 CA9Q16790 459 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 COBLL1Q53SF7 1204 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 AGAP9Q5VTM2 703 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 Q6ZPB1 254 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-204ENST00000373560 FAM83HQ6ZRV2 1179 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-204ENST00000373560 DMRTC2Q8IXT2 367 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-204ENST00000373560 DNAAF3Q8N9W5 541 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 PTERQ96BW5 349 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 ALPK1Q96QP1 1244 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 MGME1Q9BQP7 344 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 TIMM29Q9BSF4 260 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 SLC7A5P2Q9GIP4 190 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 FANCEQ9HB96 536 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms