RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 HENMT1Q5T8I9 393 aaKnown RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 TLDC1Q6P9B6 456 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 PARS2Q7L3T8 475 aaKnown RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 RNF148Q8N7C7 305 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 OR4F6Q8NGB9 312 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 UBTD2Q8WUN7 234 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 RIOK2Q9BVS4 552 aaKnown RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 CD244Q9BZW8 370 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 IPPKQ9H8X2 491 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 WWOXQ9NZC7 414 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 GPR45Q9Y5Y3 372 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 TRANK1O15050 2925 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 HEPACAM2A8MVW5 462 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 FADS2P1A8MWK0 482 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 EIF3FO00303 357 aaPredicted RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 MATN4O95460 622 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 CAPN1P07384 714 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 RPSAP08865 295 aaKnown RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 IDO1P14902 403 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 ARL1P40616 181 aaPredicted RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 GDF5P43026 501 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 DIO3P55073 304 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 GSTA3Q16772 222 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 RARS2Q5T160 578 aaKnown RBP19.24■□□□□ 0.67
HDAC1-201ENST00000373548 SERPINA13PQ6UXR4 307 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 MBOAT1Q6ZNC8 495 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 SPATA19Q7Z5L4 167 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 TECPR1Q7Z6L1 1165 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 TRAM1L1Q8N609 369 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 METTL6Q8TCB7 284 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 GDPD5Q8WTR4 605 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 DCUN1D1Q96GG9 259 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 FAM83CQ9BQN1 747 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 PFDN4Q9NQP4 134 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 MCM8Q9UJA3 840 aa19.24■□□□□ 0.67
HDAC1-201ENST00000373548 KIF26AQ9ULI4 1882 aaPredicted RBP19.23■□□□□ 0.67
HDAC1-201ENST00000373548 NVLO15381 856 aaKnown RBP19.23■□□□□ 0.67
HDAC1-201ENST00000373548 SGTAO43765 313 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 OTCP00480 354 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 MSX2P35548 267 aaPredicted RBP19.23■□□□□ 0.67
HDAC1-201ENST00000373548 HTR6P50406 440 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 TAF11Q15544 211 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 GET4Q7L5D6 327 aaPredicted RBP19.23■□□□□ 0.67
HDAC1-201ENST00000373548 ATP6V1E2Q96A05 226 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 RAD18Q9NS91 495 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 DEC1Q9P2X7 70 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 ITM2BQ9Y287 266 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 COL4A3Q01955 1670 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
HDAC1-201ENST00000373548 E7ENX8 843 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 NR5A2O00482 541 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 KPNA3O00505 521 aaPredicted RBP19.22■□□□□ 0.67
HDAC1-201ENST00000373548 NUAK1O60285 661 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 KATNA1O75449 491 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 BAG2O95816 211 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 HLA-EP13747 358 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 ME2P23368 584 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 METAP1P53582 386 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 HSPA14Q0VDF9 509 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 GRIN2CQ14957 1233 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 LIPIQ6XZB0 460 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 HACD2Q6Y1H2 254 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 RNF111Q6ZNA4 994 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 Q6ZSR9 355 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 ADGRG6Q86SQ4 1221 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 KBTBD6Q86V97 674 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 RETREG3Q86VR2 466 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 VRK3Q8IV63 474 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 DDHD1Q8NEL9 900 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 CCT7Q99832 543 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 AIG1Q9NVV5 245 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 OPTCQ9UBM4 332 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 LRRK1Q38SD2 2015 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 CAPN3P20807 821 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 IRX1P78414 480 aaPredicted RBP19.22■□□□□ 0.67
HDAC1-201ENST00000373548 MS4A2Q01362 244 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 CREB5Q02930 508 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 RPS6KA2Q15349 733 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 FNDC3BQ53EP0 1204 aaKnown RBP19.22■□□□□ 0.67
HDAC1-201ENST00000373548 SFTPA1Q8IWL2 248 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 SLC45A3Q96JT2 553 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 ZSCAN5AQ9BUG6 496 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 HPS4Q9NQG7 708 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 RIC8BQ9NVN3 520 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 ADA2Q9NZK5 511 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 PDE10AQ9Y233 779 aa19.22■□□□□ 0.67
HDAC1-201ENST00000373548 BBIP1A8MTZ0 92 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 C9JVG2 144 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 CFAP99D6REC4 459 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 FCARP24071 287 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 PSMD8P48556 350 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 MRPL19P49406 292 aaKnown RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 BOP1Q14137 746 aaKnown RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 C6orf136Q5SQH8 315 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 ZNF648Q5T619 568 aaPredicted RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 ERAP2Q6P179 960 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 C8orf82Q6P1X6 216 aaPredicted RBP19.21■□□□□ 0.67
HDAC1-201ENST00000373548 LAYNQ6UX15 382 aa19.21■□□□□ 0.67
HDAC1-201ENST00000373548 MILR1Q7Z6M3 343 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms