RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 CLIP4Q8N3C7 705 aa23.51■■□□□ 1.35
CCND3-202ENST00000372988 ARL10Q8N8L6 244 aa23.51■■□□□ 1.35
CCND3-202ENST00000372988 RTL3Q8N8U3 475 aaKnown RBP23.51■■□□□ 1.35
CCND3-202ENST00000372988 ARRDC4Q8NCT1 418 aa23.51■■□□□ 1.35
CCND3-202ENST00000372988 NUDT8Q8WV74 236 aa23.51■■□□□ 1.35
CCND3-202ENST00000372988 TPRKBQ9Y3C4 175 aa23.51■■□□□ 1.35
CCND3-202ENST00000372988 ANKRD34BA5PLL1 514 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 ATXN1LP0C7T5 689 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 PFKLP17858 780 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 PSMB9P28065 219 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 FMO3P31513 532 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 ST13P50502 369 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 DGKQP52824 942 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 VGLL4Q14135 290 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 TSNQ15631 228 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 HABP4Q5JVS0 413 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 BRMS1LQ5PSV4 323 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 TUBA3EQ6PEY2 450 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 GIPC2Q8TF65 315 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 FCRL2Q96LA5 508 aaPredicted RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 NDEL1Q9GZM8 345 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 NOL6Q9H6R4 1146 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 PARVBQ9HBI1 364 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 VAPAQ9P0L0 249 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 INVSQ9Y283 1065 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 PCDHB14Q9Y5E9 798 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 ENPP3O14638 875 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 ANKRD28O15084 1053 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 IRAK2O43187 625 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 DFNA5O60443 496 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 MT-ND2P03891 347 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 DARSP14868 501 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 SPNP16150 400 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 CASP3P42574 277 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 DSC2Q02487 901 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 RBBP7Q16576 425 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 UBXN11Q5T124 520 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 STEAP3Q658P3 488 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 MRNIPQ6NTE8 343 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 PAQR3Q6TCH7 311 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 GALNT13Q8IUC8 556 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 CHPFQ8IZ52 775 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 MCFD2Q8NI22 146 aa23.5■■□□□ 1.35
CCND3-202ENST00000372988 FUBP1Q96AE4 644 aaKnown RBP23.5■■□□□ 1.35
CCND3-202ENST00000372988 PABPN1LA6NDY0 278 aaKnown RBP23.49■■□□□ 1.35
CCND3-202ENST00000372988 SAGE2PA6NJ88 616 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 TAF4O00268 1085 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 USP2O75604 605 aaPredicted RBP23.49■■□□□ 1.35
CCND3-202ENST00000372988 FTH1P02794 183 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 G6PDP11413 515 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 TGFBR1P36897 503 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 TGFBR2P37173 567 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 CXCR4P61073 352 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 KIAA0040Q15053 153 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 SLX4IPQ5VYV7 408 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 VASH1Q7L8A9 365 aaPredicted RBP23.49■■□□□ 1.35
CCND3-202ENST00000372988 SETD9Q8NE22 299 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 OR56A4Q8NGH8 313 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 RPL3LQ92901 407 aaKnown RBP23.49■■□□□ 1.35
CCND3-202ENST00000372988 SMARCD1Q96GM5 515 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 ITCHQ96J02 903 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 KAT8Q9H7Z6 458 aaKnown RBP23.49■■□□□ 1.35
CCND3-202ENST00000372988 SYTL2Q9HCH5 934 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 CSNK1G1Q9HCP0 422 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 GALPQ9UBC7 116 aa23.49■■□□□ 1.35
CCND3-202ENST00000372988 LCHNA4D1U4 455 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 CDC7O00311 574 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 RENBPP51606 427 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 ITKQ08881 620 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 DGCR6Q14129 220 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 PTPRCAPQ14761 206 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 PCBP1Q15365 356 aaKnown RBP eCLIP23.48■■□□□ 1.353e-8■■□□□ 11.4
CCND3-202ENST00000372988 TRIP4Q15650 581 aaPredicted RBP23.48■■□□□ 1.35
CCND3-202ENST00000372988 AAK1Q2M2I8 961 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 CYP20A1Q6UW02 462 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 GPRIN3Q6ZVF9 776 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 PLD3Q8IV08 490 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 POC5Q8NA72 575 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 EMID1Q96A84 441 aaPredicted RBP23.48■■□□□ 1.35
CCND3-202ENST00000372988 TADA1Q96BN2 335 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 SENP8Q96LD8 212 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 ACOT13Q9NPJ3 140 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 MPP6Q9NZW5 540 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 RBPJLQ9UBG7 517 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 OPTCQ9UBM4 332 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 PIN4Q9Y237 131 aaKnown RBP23.48■■□□□ 1.35
CCND3-202ENST00000372988 MED16Q9Y2X0 877 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 ORC6Q9Y5N6 252 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 ZBBXA8MT70 800 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 MITFO75030 526 aaPredicted RBP23.48■■□□□ 1.35
CCND3-202ENST00000372988 SCELO95171 688 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 FCGRTP55899 365 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 CAMK2BQ13554 666 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 GBX1Q14549 363 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 CCDC81Q6ZN84 652 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 DPP9Q86TI2 863 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 HIPK1Q86Z02 1210 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 OR10A6Q8NH74 314 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 LILRB4Q8NHJ6 448 aa23.48■■□□□ 1.35
CCND3-202ENST00000372988 MAGIXQ9H6Y5 334 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms