RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 KIAA0319Q5VV43 1072 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 PIM3Q86V86 326 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 DPP10Q8N608 796 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 SEPT1Q8WYJ6 367 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 DPF3Q92784 378 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 ITPAQ9BY32 194 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 PLEKHA5Q9HAU0 1116 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.57
CTCFL-202ENST00000371196 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-202ENST00000371196 I6L893 689 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-202ENST00000371196 FAM20BO75063 409 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 ANXA9O76027 345 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 CYP4B1P13584 511 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 CYP2C18P33260 490 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 LIPAP38571 399 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 SLC26A3P40879 764 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 CLCN3P51790 818 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 PRKG2Q13237 762 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 STARD3Q14849 445 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 BCL7AQ4VC05 210 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 Q5BKY6 102 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.58
CTCFL-202ENST00000371196 UNC93AQ86WB7 457 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 GRAMD2AQ8IUY3 354 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-202ENST00000371196 KLHDC8BQ8IXV7 354 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 PROKR1Q8TCW9 393 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 SLC2A14Q8TDB8 520 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 SH3RF2Q8TEC5 729 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 GIPC2Q8TF65 315 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 C18orf25Q96B23 403 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-202ENST00000371196 ZNF214Q9UL59 606 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-202ENST00000371196 BTBD3Q9Y2F9 522 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 GRIP1Q9Y3R0 1128 aa11.46□□□□□ -0.58
CTCFL-202ENST00000371196 M6PRP20645 277 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 HCAR3P49019 387 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 HUNKP57058 714 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 GBX1Q14549 363 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ATP6AP1LQ52LC2 224 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ERAP2Q6P179 960 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 HORMAD1Q86X24 394 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 OR2T12Q8NG77 320 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 GDF15Q99988 308 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RIBC2Q9H4K1 309 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ACAD9Q9H845 621 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SEMA4BQ9NPR2 832 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PRDM8Q9NQV8 689 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 C14orf119Q9NWQ9 140 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ZIM2Q9NZV7 527 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 CDH9Q9ULB4 789 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SPEF1Q9Y4P9 236 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PNMA8CA0A1B0GUJ8 204 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 KRT87PA6NCN2 255 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 CAPN5O15484 640 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PMPCBO75439 489 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 WISP3O95389 354 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SLC4A1P02730 911 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 CD1DP15813 335 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 IGFBP5P24593 272 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ZNF135P52742 658 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PLIN5Q00G26 463 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 GPR50Q13585 617 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 CDONQ4KMG0 1287 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SCIMPQ6UWF3 145 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ZNF517Q6ZMY9 492 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 VN1R5Q7Z5H4 357 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 NRARPQ7Z6K4 114 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 ZFAND4Q86XD8 727 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RHBDF1Q96CC6 855 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RMDN1Q96DB5 314 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PABPC5Q96DU9 382 aaKnown RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PDLIM5Q96HC4 596 aaKnown RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 TMEM209Q96SK2 561 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RUBCNLQ9H714 662 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 RAPGEFL1Q9UHV5 662 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PEX16Q9Y5Y5 336 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 COL11A1P12107 1806 aaPredicted RBP11.45□□□□□ -0.58
CTCFL-202ENST00000371196 YES1P07947 543 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 MTHFD2P13995 350 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 PKLRP30613 574 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 HTR2BP41595 481 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 SLC15A1P46059 708 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 FCHO2Q0JRZ9 810 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 LCP2Q13094 533 aa11.45□□□□□ -0.58
CTCFL-202ENST00000371196 EFCAB12Q6NXP0 572 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms