RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TMEM145Q8NBT3 493 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CENPIQ92674 756 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 MTFMTQ96DP5 389 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 PHF21BQ96EK2 531 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CNDP2Q96KP4 475 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 NRTNQ99748 197 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PRMT1Q99873 361 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 APOOQ9BUR5 198 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 FADS3Q9Y5Q0 445 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 INTS1Q8N201 2190 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 A0A0J9YYE9 177 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 MYOCOSA0A1B0GUC4 107 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 DPPA5A6NC42 116 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 METTL12A8MUP2 240 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PRPF4O43172 522 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP1-202ENST00000371146 FAM155BO75949 473 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TRBC1P01850 177 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ATXN1LP0C7T5 689 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 LHCGRP22888 699 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 DRD3P35462 400 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SPAM1P38567 509 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PIK3CGP48736 1102 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 DUOXA1Q1HG43 343 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 SNX30Q5VWJ9 437 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SMYD5Q6GMV2 418 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 NLRP14Q86W24 1093 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 RASGRP3Q8IV61 690 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 LRRC57Q8N9N7 239 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 OSBPL1AQ9BXW6 950 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 DUSP15Q9H1R2 295 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 LRRC19Q9H756 370 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 PFDN4Q9NQP4 134 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ITM2CQ9NQX7 267 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CATSPERZQ9NTU4 200 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SCHIP1Q9P0W5 487 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 LRIT1Q9P2V4 623 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SPASTQ9UBP0 616 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 LHX3Q9UBR4 397 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TRMT6Q9UJA5 497 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 HS3ST2Q9Y278 367 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ICE1Q9Y2F5 2266 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TSPAN6O43657 245 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ANP32DO95626 131 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 LDOC1O95751 146 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 ZNF7P17097 686 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 ACADVLP49748 655 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 AIF1P55008 147 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 BTKQ06187 659 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 GKAP1Q5VSY0 366 aaPredicted RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 LINC00523Q86TU6 105 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 OR4L1Q8NH43 312 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 DOK4Q8TEW6 326 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 GIMAP5Q96F15 307 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 HES6Q96HZ4 224 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 HBEGFQ99075 208 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 ARHGAP9Q9BRR9 750 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 TBC1D10AQ9BXI6 508 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 NSRP1Q9H0G5 558 aaKnown RBP6.93□□□□□ -1.3
USP1-202ENST00000371146 TRPV4Q9HBA0 871 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 CD274Q9NZQ7 290 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 SLC27A6Q9Y2P4 619 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 STARD13Q9Y3M8 1113 aa6.93□□□□□ -1.3
USP1-202ENST00000371146 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 A6NL46 340 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 MAGEC1O60732 1142 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SPAG7O75391 227 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 EFEMP2O95967 443 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 PVRP15151 417 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 BPIP17213 487 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CD27P26842 260 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SKIV2L2P42285 1042 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 RPL21P46778 160 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 SRP54P61011 504 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 RACK1P63244 317 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 LRRC38Q5VT99 294 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 C19orf48Q6RUI8 117 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 KCNMB4Q86W47 210 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 C4orf33Q8N1A6 199 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 GALNT6Q8NCL4 622 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 OR56A4Q8NGH8 313 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 BRSK1Q8TDC3 778 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 HDAC11Q96DB2 347 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 MRGPRX3Q96LB0 322 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 FAM192AQ9GZU8 254 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 L3MBTL1Q9Y468 752 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 A0A1W2PPC4 97 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SYNDIG1LA6NDD5 238 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 C5orf60A6NFR6 353 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ARHGAP33O14559 1287 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CD3EAPO15446 510 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 GREM1O60565 184 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ATP6V1G2O95670 118 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 IGLV3-27P01718 113 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 NTRK1P04629 796 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 APOA4P06727 396 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms