RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 AP1G1O43747 822 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SUPT7LO94864 414 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 EPOP01588 193 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ATP5F1P24539 256 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 SERPINA4P29622 427 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 RECQLP46063 649 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 LEPRP48357 1165 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 NR1H2P55055 460 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 MS4A2Q01362 244 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CEACAM7Q14002 265 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 NANOGP8Q6NSW7 305 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 PAQR3Q6TCH7 311 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 DCDC5Q6ZRR9 648 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ADGRG6Q86SQ4 1221 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 TMEM151AQ8N4L1 468 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 OR2A12Q8NGT7 310 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CALML6Q8TD86 181 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 FGF14Q92915 247 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SCAMP4Q969E2 229 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 TIFAQ96CG3 184 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ACOX2Q99424 681 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 GPR21Q99679 349 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CCDC68Q9H2F9 335 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ASB8Q9H765 288 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 MRM3Q9HC36 420 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 NLE1Q9NVX2 485 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 PSMD13Q9UNM6 376 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ERVW-1Q9UQF0 538 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 GOLGA4Q13439 2230 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 WDR87Q6ZQQ6 2873 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 CBFA2T3O75081 653 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 LHCGRP22888 699 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 STC1P52823 247 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 AGAP9Q5VTM2 703 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 PARM1Q6UWI2 310 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 ZNF783Q6ZMS7 281 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TTC30BQ8N4P2 665 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 DCBLD1Q8N8Z6 715 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TSPAN14Q8NG11 270 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CHFRQ96EP1 664 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 LMLNQ96KR4 655 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 RANBP9Q96S59 729 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 MYADMQ96S97 322 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CENPOQ9BU64 300 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 WRAP53Q9BUR4 548 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 SEMA6AQ9H2E6 1030 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TPK1Q9H3S4 243 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SFXN1Q9H9B4 322 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 NOX1Q9Y5S8 564 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SLC30A1Q9Y6M5 507 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 A0A0J9YYE9 177 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 KRT87PA6NCN2 255 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TBC1D3BA6NDS4 549 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 H3BMM5 538 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TRIM16O95361 564 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 TRBC1P01850 177 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CTSLP07711 333 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CD247P20963 164 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 PRKAA2P54646 552 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CDH13P55290 713 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SEC13P55735 322 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 FRG1Q14331 258 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 MPP7Q5T2T1 576 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CLEC6AQ6EIG7 209 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 PIWIL4Q7Z3Z4 852 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 KDM1BQ8NB78 822 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SMARCD2Q92925 531 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 SIAEQ9HAT2 523 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 IL1RL2Q9HB29 575 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 FBRSL1Q9HCM7 1045 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 TBC1D14Q9P2M4 693 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 EPS15L1Q9UBC2 864 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 IKZF3Q9UKT9 509 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 PRPF19Q9UMS4 504 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 PIKFYVEQ9Y2I7 2098 aa10.5□□□□□ -0.73
TPM3-212ENST00000368533 HELZP42694 1942 aaKnown RBP10.5□□□□□ -0.73
TPM3-212ENST00000368533 UBDO15205 165 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 FZD6O60353 706 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 SIX3O95343 332 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 BPIP17213 487 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 NR4A1P22736 598 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 HOXA9P31269 272 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 AP1S1P61966 158 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 POU4F1Q01851 419 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 CHRNA6Q15825 494 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 PPP1R3AQ16821 1122 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 FNDC3BQ53EP0 1204 aaKnown RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 CARD16Q5EG05 197 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 OGFRL1Q5TC84 451 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 CYP2R1Q6VVX0 501 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 LILRA2Q8N149 483 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 GPR26Q8NDV2 337 aa10.49□□□□□ -0.73
TPM3-212ENST00000368533 GABPB2Q8TAK5 448 aaPredicted RBP10.49□□□□□ -0.73
TPM3-212ENST00000368533 OSCP1Q8WVF1 389 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms