RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RAB17Q9H0T7 212 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 FAM221BA6H8Z2 402 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 E7ESA3 106 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PRMT5O14744 637 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 OGNP20774 298 aaKnown RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PPARGP37231 505 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 HALP42357 657 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC1A2P43004 574 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 EIF3BP55884 814 aaKnown RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PDIA2Q13087 525 aaKnown RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CTBP1Q13363 440 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 BRD3Q15059 726 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 HSP90AA5PQ58FG0 334 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CTSL3PQ5NE16 218 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZDHHC24Q6UX98 284 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CCNI2Q6ZMN8 369 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 UNC5AQ6ZN44 842 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 CILP2Q8IUL8 1156 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 DCBLD1Q8N8Z6 715 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 ELMO1Q92556 727 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 LPGAT1Q92604 370 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 GFM1Q96RP9 751 aaKnown RBP14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 OR52A5Q9H2C5 316 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 VPS37BQ9H9H4 285 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 ACSL5Q9ULC5 683 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 PCDHB1Q9Y5F3 818 aa14.76□□□□□ -0.05
SMPDL3A-201ENST00000368440 IGHV1OR21-1A0A087WYE8 117 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 KLHL33A6NCF5 533 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 D6RAR5 112 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 QSOX1O00391 747 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 VIPP01282 170 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 FTH1P02794 183 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 MYBL2P10244 700 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 THOC5Q13769 683 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 BOP1Q14137 746 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 SPIDRQ14159 915 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 GLE1Q53GS7 698 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 SPANXN3Q5MJ09 141 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 CAPRIN2Q6IMN6 1127 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 B3GNT8Q7Z7M8 397 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 SDCCAG8Q86SQ7 713 aaPredicted RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 TRIM48Q8IWZ4 208 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 FBXO36Q8NEA4 188 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 FBXO25Q8TCJ0 367 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 ART4Q93070 314 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 CXorf40BQ96DE9 158 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 C12orf66Q96MD2 445 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 BIRC8Q96P09 236 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC38A3Q99624 504 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 STN1Q9H668 368 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 RDH14Q9HBH5 336 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 FBXO6Q9NRD1 293 aaPredicted RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 IMP3Q9NV31 184 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 KCNK4Q9NYG8 393 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC17A6Q9P2U8 582 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZC3H7BQ9UGR2 993 aaKnown RBP14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 RAB21Q9UL25 225 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 CRYL1Q9Y2S2 319 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 MSRB2Q9Y3D2 182 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 FRYQ5TBA9 3013 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 WDFY3Q8IZQ1 3526 aa14.75□□□□□ -0.05
SMPDL3A-201ENST00000368440 NDC80O14777 642 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CSO75390 466 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 TTC4O95801 387 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 S1PR4O95977 384 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC35G4P0C7Q5 338 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 RPS3P23396 243 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CD1CP29017 333 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 FMO4P31512 558 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CCR7P32248 378 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CSF2RBP32927 897 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 GPR3P46089 330 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 PLTPP55058 493 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CSE1LP55060 971 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 MPP1Q00013 466 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 FOXK2Q01167 660 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CFHR1Q03591 330 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CAMK2BQ13554 666 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 TRMT10BQ6PF06 316 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 RBM44Q6ZP01 1051 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 USP53Q70EK8 1073 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 SPNS2Q8IVW8 549 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 JPH3Q8WXH2 748 aaPredicted RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 LRRC39Q96DD0 335 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 NUDT22Q9BRQ3 303 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 NAT9Q9BTE0 207 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 FOXP3Q9BZS1 431 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC40A1Q9NP59 571 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 IARS2Q9NSE4 1012 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 POT1Q9NUX5 634 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLC5A10A0PJK1 596 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 BHMG1C9JSJ3 638 aaPredicted RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 TCEA3O75764 348 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 MTHFD1P11586 935 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CBLBQ13191 982 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 GPR18Q14330 331 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms