RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RGSL1A5PLK6 1076 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ANKRD62A6NC57 917 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ZNF749O43361 778 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 UNC5CO95185 931 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 CALB1P05937 261 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 CBSLP0DN79 551 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 CBSP35520 551 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ANKRD20A8PQ5CZ79 823 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ERMARDQ5T6L9 678 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ALS2CLQ60I27 953 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 TMEM207Q6UWW9 146 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 TGIF2LYQ8IUE0 185 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ATPAF2Q8N5M1 289 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 GPR26Q8NDV2 337 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 CATSPER1Q8NEC5 780 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 EID2BQ96D98 161 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 MAGEB10Q96LZ2 347 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-202ENST00000367740 C17orf62Q9BQA9 187 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ENKD1Q9H0I2 346 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 SYTL2Q9HCH5 934 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 SEMA3GQ9NS98 782 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 ETNK2Q9NVF9 386 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 FBXL4Q9UKA2 621 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 PSMD13Q9UNM6 376 aa14.22□□□□□ -0.13
VAMP4-202ENST00000367740 OR6C74A6NCV1 312 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 E7EQ34 232 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 GFPT2O94808 682 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 CLDN14O95500 239 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 VCLP18206 1134 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 PREPP48147 710 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 CDH6P55285 790 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 DSC2Q02487 901 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 MAN2A1Q16706 1144 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 ALG1LQ6GMV1 187 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.21□□□□□ -0.13
VAMP4-202ENST00000367740 TEX26Q8N6G2 289 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 CCHCR1Q8TD31 782 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 NSMCE1Q8WV22 266 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 PTERQ96BW5 349 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 ZSCAN5AQ9BUG6 496 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 NUP85Q9BW27 656 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 REPIN1Q9BWE0 567 aaKnown RBP14.21□□□□□ -0.13
VAMP4-202ENST00000367740 POLR1EQ9GZS1 481 aaKnown RBP14.21□□□□□ -0.13
VAMP4-202ENST00000367740 PCSK1NQ9UHG2 260 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 GPN3Q9UHW5 284 aaPredicted RBP14.21□□□□□ -0.13
VAMP4-202ENST00000367740 RWDD2AQ9UIY3 292 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 POMT2Q9UKY4 750 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 CDYLQ9Y232 598 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 PCDHGB6Q9Y5F9 930 aa14.21□□□□□ -0.13
VAMP4-202ENST00000367740 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CDK14O94921 469 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 HBQ1P09105 142 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 MTHFD1P11586 935 aaKnown RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 KLK2P20151 261 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CDH3P22223 829 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 HCAR3P49019 387 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 LMAN1P49257 510 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 DCDC1P59894 354 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CSNK1G2P78368 415 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 ITKQ08881 620 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 GALNT3Q14435 633 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 SLC9A5Q14940 896 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CLEC16AQ2KHT3 1053 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 MRPL14Q6P1L8 145 aaKnown RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 TRAPPC5Q8IUR0 188 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 TRAM1L1Q8N609 369 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 OR1N1Q8NGS0 311 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 TREX2Q9BQ50 279 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CXXC4Q9H2H0 198 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 NDST4Q9H3R1 872 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 C1GALT1Q9NS00 363 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 IMP3Q9NV31 184 aaKnown RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 SERTAD3Q9UJW9 196 aa14.2□□□□□ -0.14
VAMP4-202ENST00000367740 CFAP20Q9Y6A4 193 aaKnown RBP14.2□□□□□ -0.14
VAMP4-202ENST00000367740 FANCGO15287 622 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 ST6GAL1P15907 406 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 POLR2CP19387 275 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 MST1P26927 711 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 RPL26P61254 145 aaKnown RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 DMPKQ09013 629 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 INAQ16352 499 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 QPCTQ16769 361 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 ARMC6Q6NXE6 501 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 FAM83HQ6ZRV2 1179 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 LINC00696Q6ZRV3 163 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 IFT80Q9P2H3 777 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 NFKBIL1Q9UBC1 381 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 NDOR1Q9UHB4 597 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 SLC24A2Q9UI40 661 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 TMPRSS11EQ9UL52 423 aa14.19□□□□□ -0.14
VAMP4-202ENST00000367740 RPL26L1Q9UNX3 145 aaKnown RBP14.19□□□□□ -0.14
VAMP4-202ENST00000367740 H3BMH7 237 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 SMSP52788 366 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 SRSF11Q05519 484 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms